# INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben
.SUFFIXES: .o .cxx .depend

CPP_OBJECTS = SQ_main.o SQ_functions.o SQ_GroupData.o

$(MAIN): $(CPP_OBJECTS)
	$(LINK_STATIC_LIB) $(MAIN) $(CPP_OBJECTS)

.cxx.o:
	$(CPP) $(cflags) -c $<  $(CPPINCLUDES)

clean:
	rm -f $(CPP_OBJECTS) *.a

DEPENDS = $(CPP_OBJECTS:.o=.depend)
depends: $(DEPENDS)
	@cat $(DEPENDS) | grep -v '^#' >>Makefile
	@rm $(DEPENDS)
$(DEPENDS): depend.init
depend.init:
	$(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies
.c.depend:
	$(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@
.cxx.depend:
	$(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@

# DO NOT DELETE THIS LINE -- make depend depends on it.

# Do not add dependencies manually - use 'make depend' in $ARBHOME
# For formatting issues see SOURCE_TOOLS/fix_depends.pl

SQ_functions.o: SQ_ambiguities.h
SQ_functions.o: SQ_functions.h
SQ_functions.o: SQ_GroupData.h
SQ_functions.o: SQ_helix.h
SQ_functions.o: SQ_physical_layout.h
SQ_functions.o: $(ARBHOME)/INCLUDE/ad_k_prot.h
SQ_functions.o: $(ARBHOME)/INCLUDE/ad_prot.h
SQ_functions.o: $(ARBHOME)/INCLUDE/ad_t_prot.h
SQ_functions.o: $(ARBHOME)/INCLUDE/arb_assert.h
SQ_functions.o: $(ARBHOME)/INCLUDE/arbdb.h
SQ_functions.o: $(ARBHOME)/INCLUDE/arbdb_base.h
SQ_functions.o: $(ARBHOME)/INCLUDE/arbdbt.h
SQ_functions.o: $(ARBHOME)/INCLUDE/attributes.h
SQ_functions.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx
SQ_functions.o: $(ARBHOME)/INCLUDE/aw_device.hxx
SQ_functions.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx
SQ_functions.o: $(ARBHOME)/INCLUDE/aw_position.hxx
SQ_functions.o: $(ARBHOME)/INCLUDE/aw_preset.hxx
SQ_functions.o: $(ARBHOME)/INCLUDE/aw_root.hxx
SQ_functions.o: $(ARBHOME)/INCLUDE/aw_window.hxx
SQ_functions.o: $(ARBHOME)/INCLUDE/awt.hxx
SQ_functions.o: $(ARBHOME)/INCLUDE/awt_iupac.hxx
SQ_functions.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx
SQ_functions.o: $(ARBHOME)/INCLUDE/awt_tree.hxx
SQ_functions.o: $(ARBHOME)/INCLUDE/BI_helix.hxx
SQ_functions.o: $(ARBHOME)/INCLUDE/smartptr.h

SQ_GroupData.o: SQ_GroupData.h
SQ_GroupData.o: $(ARBHOME)/INCLUDE/ad_k_prot.h
SQ_GroupData.o: $(ARBHOME)/INCLUDE/arb_assert.h
SQ_GroupData.o: $(ARBHOME)/INCLUDE/arbdb_base.h
SQ_GroupData.o: $(ARBHOME)/INCLUDE/attributes.h

SQ_main.o: ../AWT/awtfilter.hxx
SQ_main.o: seq_quality.h
SQ_main.o: SQ_functions.h
SQ_main.o: SQ_GroupData.h
SQ_main.o: $(ARBHOME)/INCLUDE/ad_k_prot.h
SQ_main.o: $(ARBHOME)/INCLUDE/ad_prot.h
SQ_main.o: $(ARBHOME)/INCLUDE/ad_t_prot.h
SQ_main.o: $(ARBHOME)/INCLUDE/arb_assert.h
SQ_main.o: $(ARBHOME)/INCLUDE/arbdb.h
SQ_main.o: $(ARBHOME)/INCLUDE/arbdb_base.h
SQ_main.o: $(ARBHOME)/INCLUDE/arbdbt.h
SQ_main.o: $(ARBHOME)/INCLUDE/attributes.h
SQ_main.o: $(ARBHOME)/INCLUDE/aw_awars.hxx
SQ_main.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx
SQ_main.o: $(ARBHOME)/INCLUDE/aw_device.hxx
SQ_main.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx
SQ_main.o: $(ARBHOME)/INCLUDE/aw_position.hxx
SQ_main.o: $(ARBHOME)/INCLUDE/aw_root.hxx
SQ_main.o: $(ARBHOME)/INCLUDE/aw_window.hxx
SQ_main.o: $(ARBHOME)/INCLUDE/awt.hxx
SQ_main.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx
SQ_main.o: $(ARBHOME)/INCLUDE/awt_sel_boxes.hxx
SQ_main.o: $(ARBHOME)/INCLUDE/awt_tree.hxx
SQ_main.o: $(ARBHOME)/INCLUDE/smartptr.h