#Please insert up references in the next lines (line starts with keyword UP) UP arb.hlp UP glossary.hlp UP pars.hlp UP mode_nni.hlp UP mode_optimize.hlp #Please insert subtopic references (line starts with keyword SUB) #SUB subtopic.hlp # Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain} #************* Title of helpfile !! and start of real helpfile ******** TITLE K.L. Optimization of the Tree OCCURRENCE ARB_PARSIMONY/ DESCRIPTION Searches for a better (more parsimonious) tree by swapping subtrees which are separated by up to 15 edges. NOTES The current parsimony value (number of base changes needed) is displayed after the 'Current Par' prompt in the upper part of the 'ARB_PARSIMONY' window and the 'Message' window (pops up while calculating). On cycle of swapping is performed. EXAMPLES None WARNINGS None BUGS No bugs known