#Please insert up references in the next lines (line starts with keyword UP) UP arb.hlp UP glossary.hlp UP pars.hlp UP mode_kernlin.hlp UP mode_optimize.hlp #Please insert subtopic references (line starts with keyword SUB) #SUB subtopic.hlp # Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain} #************* Title of helpfile !! and start of real helpfile ******** TITLE Nearest Neighbour Interchange OCCURRENCE ARB_PARSIMONY/ DESCRIPTION Searches for a better (more parsimonious) tree by swapping the relative positions of subtrees separated by not more than one edge. NOTES The current parsimony value (number of base changes needed) is displayed after the 'Current Par' prompt in the upper part of the 'ARB_PARSIMONY' window and the 'Message' window (pops up while calculating). One cycle of swapping is performed. EXAMPLES None WARNINGS None BUGS No bugs known