#Please insert up references in the next lines (line starts with keyword UP) UP arb.hlp UP glossary.hlp UP species.hlp #Please insert subtopic references (line starts with keyword SUB) SUB mark_genes.hlp SUB selected_gene.hlp SUB gene_species.hlp # SUB gene_info.hlp SUB organisms.hlp # Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain} #************* Title of helpfile !! and start of real helpfile ******** TITLE What are Genes? DESCRIPTION One gene is one database entry containing subentries which describe the gene. Every gene belongs to a specific organism, but one organism may have many genes. Main (reserved) entries of a gene: name, pos_begin, pos_end, complement, pos_joined, pos_begin1, pos_end1, pos_begin2, pos_end2, ... pos_uncertain, codon_start, transl_table See LINK{gene_info.hlp} for details about these fields. NOTE The main-sequence of a organism(species) is stored in the alignment 'ali_genom'. You should not change this alignment. WARNINGS The alignment 'ali_genom' should NOT contain any gaps!!!! BUGS No known bugs