#Please insert up references in the next lines (line starts with keyword UP)
UP	arb.hlp
UP	glossary.hlp

#Please insert subtopic references  (line starts with keyword SUB)
#SUB	subtopic.hlp

# Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain}

#************* Title of helpfile !! and start of real helpfile ********
TITLE		Dot potentially missing bases

OCCURRENCE	ARB_EDIT4/Edit/Dot potentially missing bases

DESCRIPTION     This function changes all gaps ('-') where bases are possibly
                missing into dots ('.').

                It applies to all (or all marked) sequences of one group.
                The cursor has to be placed on the consensus of the group.

                In columns where the group consensus shows an uppercase base,
                all gaps get replaced by dots.

                Additionally an SAI can be used to restrict the affected columns:

                - Select the wanted SAI
                - Edit characters that shall be used to select a column.

                Click on the 'Consensus' button to change the way how the consensus
                is calculated (see also 'LINK{e4_consensus.hlp}')

NOTES           None

EXAMPLES	None

WARNINGS	None

BUGS		No bugs known