/*ARBDB ASCII*/ species_data :7000 %% (% species %$ (% name "genome00" ARB_imported_from "AB735678.txt" ARB_imported_format "EMBL" gene_data %% (% gene %% (% name "source" type "source" ARB_display_hidden %y 1 pos_start "1" pos_stop "15341" pos_complement "0" pos_certain "==" db_xref "taxon:497819" isolate "CJP-YT-2012" mol_type "genomic DNA" organelle "mitochondrion" organism "Chionoecetes japonicus pacificus" sub_species "pacificus" %) /*gene*/ gene %% (% name "CDS_COI_CytochromeOxidaseSubun" type "CDS" pos_start "1" pos_stop "1528" pos_complement "0" pos_certain "==" codon_start "1" gene "COI" note "TAA stop codon is completed by the addition of 3' Aresidues to the mRNA." product "cytochrome oxidase subunit I" protein_id "BAN60008.1" transl_except "(pos:1528,aa:TERM)" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "tRNA_TRNALeu" type "tRNA" pos_start "1532" pos_stop "1596" pos_complement "0" pos_certain "==" product "tRNA-Leu" %) /*gene*/ gene %% (% name "CDS_COII_CytochromeOxidaseSubu" type "CDS" pos_start "1606" pos_stop "2293" pos_complement "0" pos_certain "==" codon_start "1" gene "COII" note "TAA stop codon is completed by the addition of 3' Aresidues to the mRNA." product "cytochrome oxidase subunit II" protein_id "BAN60009.1" transl_except "(pos:2293,aa:TERM)" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "tRNA_TRNALys" type "tRNA" pos_start "2294" pos_stop "2360" pos_complement "0" pos_certain "==" product "tRNA-Lys" %) /*gene*/ gene %% (% name "tRNA_TRNAAsp" type "tRNA" pos_start "2361" pos_stop "2425" pos_complement "0" pos_certain "==" product "tRNA-Asp" %) /*gene*/ gene %% (% name "CDS_ATP8_ATPase8X" type "CDS" pos_start "2426" pos_stop "2584" pos_complement "0" pos_certain "==" codon_start "1" gene "ATP8" product "ATPase8" protein_id "BAN60010.1" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "CDS_ATP6_ATPase6X" type "CDS" pos_start "2578" pos_stop "3252" pos_complement "0" pos_certain "==" codon_start "1" gene "ATP6" product "ATPase6" protein_id "BAN60011.1" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "CDS_COIII_CytochromeOxidaseSub" type "CDS" pos_start "3252" pos_stop "4042" pos_complement "0" pos_certain "==" codon_start "1" gene "COIII" note "TAA stop codon is completed by the addition of 3' Aresidues to the mRNA." product "cytochrome oxidase subunit III" protein_id "BAN60012.1" transl_except "(pos:4041..4042,aa:TERM)" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "tRNA_TRNAGly" type "tRNA" pos_start "4043" pos_stop "4106" pos_complement "0" pos_certain "==" product "tRNA-Gly" %) /*gene*/ gene %% (% name "CDS_NAD3_NADHDehydrogenaseSubu" type "CDS" pos_start "4107" pos_stop "4460" pos_complement "0" pos_certain "==" codon_start "1" gene "NAD3" product "NADH dehydrogenase subunit 3" protein_id "BAN60013.1" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "tRNA_TRNAAsn" type "tRNA" pos_start "4589" pos_stop "4654" pos_complement "0" pos_certain "==" product "tRNA-Asn" %) /*gene*/ gene %% (% name "tRNA_TRNASer_1" type "tRNA" pos_start "4658" pos_stop "4727" pos_complement "0" pos_certain "==" product "tRNA-Ser" %) /*gene*/ gene %% (% name "tRNA_TRNAGlu" type "tRNA" pos_start "4729" pos_stop "4796" pos_complement "0" pos_certain "==" product "tRNA-Glu" %) /*gene*/ gene %% (% name "tRNA_TRNAHis" type "tRNA" pos_start "4819" pos_stop "4882" pos_complement "1" pos_certain "==" product "tRNA-His" %) /*gene*/ gene %% (% name "tRNA_TRNAPhe" type "tRNA" pos_start "4883" pos_stop "4946" pos_complement "1" pos_certain "==" product "tRNA-Phe" %) /*gene*/ gene %% (% name "CDS_NADH5_NADHDehydrogenaseSub" type "CDS" pos_start "4949" pos_stop "6676" pos_complement "1" pos_certain "==" codon_start "1" gene "NADH5" note "TAA stop codon is completed by the addition of 3' Aresidues to the mRNA." product "NADH dehydrogenase subunit 5" protein_id "BAN60014.1" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "CDS_NADH4_NADHDehydrogenaseSub" type "CDS" pos_start "6711" pos_stop "8047" pos_complement "1" pos_certain "==" codon_start "1" gene "NADH4" note "TAA stop codon is completed by the addition of 3' Aresidues to the mRNA." product "NADH dehydrogenase subunit 4" protein_id "BAN60015.1" transl_except "(pos:6711..6712,aa:TERM)" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "CDS_NADH4L_NADHDehydrogenaseSu" type "CDS" pos_start "8041" pos_stop "8340" pos_complement "1" pos_certain "==" codon_start "1" gene "NADH4L" product "NADH dehydrogenase subunit 4L" protein_id "BAN60016.1" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "tRNA_TRNAThr" type "tRNA" pos_start "8343" pos_stop "8406" pos_complement "0" pos_certain "==" product "tRNA-Thr" %) /*gene*/ gene %% (% name "tRNA_TRNAPro" type "tRNA" pos_start "8407" pos_stop "8469" pos_complement "1" pos_certain "==" product "tRNA-Pro" %) /*gene*/ gene %% (% name "CDS_NADH6_NADHDehydrogenaseSub" type "CDS" pos_start "8472" pos_stop "8978" pos_complement "0" pos_certain "==" codon_start "1" gene "NADH6" note "TAA stop codon is completed by the addition of 3' Aresidues to the mRNA." product "NADH dehydrogenase subunit 6" protein_id "BAN60017.1" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "CDS_Cytb_CytochromeB" type "CDS" pos_start "8978" pos_stop "10112" pos_complement "0" pos_certain "==" codon_start "1" gene "Cytb" note "TAA stop codon is completed by the addition of 3' Aresidues to the mRNA." product "cytochrome b" protein_id "BAN60018.1" transl_except "(pos:10112,aa:TERM)" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "tRNA_TRNASer_2" type "tRNA" pos_start "10113" pos_stop "10179" pos_complement "0" pos_certain "==" product "tRNA-Ser" %) /*gene*/ gene %% (% name "CDS_NADH1_NADHDehydrogenaseSub" type "CDS" pos_start "10194" pos_stop "11159" pos_complement "1" pos_certain "=>" codon_start "1" gene "NADH1" note "start codon not determined" product "NADH dehydrogenase subunit 1" protein_id "BAN60019.1" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "rRNA_LargeSubunitRibosomalRNA" type "rRNA" pos_start "11234" pos_stop "12568" pos_complement "1" pos_certain "==" product "large subunit ribosomal RNA" %) /*gene*/ gene %% (% name "tRNA_TRNAVal" type "tRNA" pos_start "12543" pos_stop "12615" pos_complement "1" pos_certain "==" product "tRNA-Val" %) /*gene*/ gene %% (% name "rRNA_SmallSubunitRibosomalRNA" type "rRNA" pos_start "12617" pos_stop "13430" pos_complement "1" pos_certain "==" product "small subunit ribosomal RNA" %) /*gene*/ gene %% (% name "tRNA_TRNAGln" type "tRNA" pos_start "13997" pos_stop "14068" pos_complement "1" pos_certain "==" product "tRNA-Gln" %) /*gene*/ gene %% (% name "tRNA_TRNAMet" type "tRNA" pos_start "14075" pos_stop "14141" pos_complement "0" pos_certain "==" product "tRNA-Met" %) /*gene*/ gene %% (% name "CDS_NADH2_NADHDehydrogenaseSub" type "CDS" pos_start "14142" pos_stop "15147" pos_complement "0" pos_certain "==" codon_start "1" gene "NADH2" note "TAA stop codon is completed by the addition of 3' Aresidues to the mRNA." product "NADH dehydrogenase subunit 2" protein_id "BAN60020.1" transl_except "(pos:15147,aa:TERM)" transl_table "5" ARB_translation_rm %y 1 %) /*gene*/ gene %% (% name "tRNA_TRNATrp" type "tRNA" pos_start "15148" pos_stop "15214" pos_complement "0" pos_certain "==" product "tRNA-Trp" %) /*gene*/ %) /*gene_data*/ ali_genom %% (% data 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cgaattattattccattctttttattatcaagcccatctatgtcattttataacaaaataaaatataataataaatctatatatttctattcatttatcttcttcaatctcgttggtataatatttccattaacttttattattccttaggattttaagttattaaaactaagtgccttcaaagcccttaaaaaagtaaacccttttaaatcctataagccctagtgctctgcacatctccagatttgcaatccgacatatttattatactttaagacctgataaaaagctaatgcttataaataaatttacaatctatcgcctatattcagccactttatc" %) /*ali_genom*/ acc "AB735678;" date "04-JUL-2013 (Rel. 117, Created)04-JUL-2013 (Rel. 117, Last updated, Version 1)" description "Chionoecetes japonicus pacificus mitochondrial DNA, complete genome,isolate: CJP-YT-2012." full_name "Chionoecetes japonicus pacificus" keywd "." org_id "AB735678; SV 1; circular; genomic DNA; STD; INV; 15341 BP." organelle "Mitochondrion" tax "Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Malacostraca;Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Brachyura; Eubrachyura;Majoidea; Majidae; Chionoecetes." author "[REF1] Yanagimoto T., Kobayashi T.; [REF2] Yanagimoto T., Kobayashi T.;" journal "[REF1] Submitted (13-JUL-2012) to the INSDC.Contact:Takashi Yanagimoto National Research Institute of FisheriesScience; 2-12-4, Fukuura, Kanazawa-ku, Yokohama, Kanagawa 236-8648, Japan [REF2] Unpublished." nuc_rp "[REF1] 1-15341" title "[REF1] ; [REF2] \"Complete mitochondrial DNA sequence of the Red Queen Crab Chionoecetesjaponicus pacificus\";" %) /*species*/ %) /*species_data*/