/*ARBDB ASCII*/
extended_data			%% (%
	extended			%$ (%
		name			:7000	"MAX_FREQUENCY"
		ali_dna				%% (%
			data				"============000857006886684066055575557754000006008000000877574000000000887654766777000655555507808066557557007000000000008555005008000000557584555864886600606555575807000808556000808000555775857975004005363876704587555888060555009775584006000788805008808808808000606556008000000565856808000808009055874606765605888800============000===="
			dat2				"============000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363752000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000============000===="
			_TYPE				"MFQ: [species: 10] [ignore gaps: yes]"
			%) /*ali_dna*/

		ali_prot			%% (%
			data				"====050846555500000760006557055586550000055000555686654808508057566566754665055005800080550004500005666688====0="
			dat2				"====000000000000000000000501000000000000000000000000050000000000000062000000000000000000000000000000000200====0="
			_TYPE				"MFQ: [species: 10] [ignore gaps: yes]"
			%) /*ali_prot*/

		showsec				%i 0
		%) /*extended*/

	extended			%$ (%
		name			:7000	"MAX_FREQUENCY_GAPS"
		ali_dna				%% (%
			data				"============000857006886555555055575557754555555555555555877574999999999887654766555777655555507808066557557007555555555555555005555555555557584555555555555555555575807555555556555555555555775857975555888777765704587555555555555009775584555555788805555555555555666606556555555555565856555555555009055874606765605888800000000000000000===="
			dat2				"============000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000===="
			_TYPE				"MFQ: [species: 10] [ignore gaps: no]"
			%) /*ali_dna*/

		showsec				%i 0
		%) /*extended*/

	extended			%$ (%
		name			:7000	"CONSENSUS"
		ali_dna				%% (%
			data				"============ATGGctAAaGAg...t..Actaacaagtg.ggtga.aa.gaagctGgttc.---------TTcaa.tacgcc---tgggtcgGtGCTGctggtaatGGtgaattcgaagc.ggtATgtc.aaggatcctaA.gag.......aa.a.gagttcAAcatg.t.ggatgg.a.ggtcccgctGgtGtcga.------accaC.aAggaa...g.ctctTTCaaccA.cc.ggtcAAATtga..g..g..c.---aTgtctgt.gaagctttcCct.t.ggt.g.TTCAagGc.gTcgagaA.....ag============aaa===="
			_TYPE				"CON: [species: all]  [number: 10]  [count gaps: on] [threshold for gaps: 60]  [simplify: off] [threshold for group: 30]  [upper: 80]  [lower: 50]"
			_SPECIES			"CytLyti6 TaxOcell BctFra12 StrRamo3 StrCoel9 MucRacem MucRace2 MucRace3 AbdGlauc CddAlbic "
			%) /*ali_dna*/

		ali_prot			%% (%
			data				"====MgKE..tyklgekeags---fkya-wvgAagtGefeagiskdpkd....e.Nm.gw.gpagv.--ttk...sFnhpgqId--.-mcvea.plg-Ftavek..====k="
			_TYPE				"CON: [species: all]  [number: 10]  [count gaps: on] [threshold for gaps: 60]  [simplify: off] [threshold for group: 30]  [upper: 80]  [lower: 50]"
			_SPECIES			"CytLyti6 TaxOcell BctFra12 StrRamo3 StrCoel9 MucRacem MucRace2 MucRace3 AbdGlauc CddAlbic "
			%) /*ali_prot*/

		showsec				%i 0
		%) /*extended*/

	extended			%$ (%
		name			:7000	"POS_VAR_BY_PARSIMONY"
		ali_dna				%% (%
			_TYPE				"PVP: Positional Variability by Parsimony: tree 'tree_prot' ntaxa 9"
			FREQUENCIES			%% (%
				NA				%N	1000001510202:3003.31.0319.020D.050E02-0F.01.-48686D-161BC141F0560AC0D38230247CA5829EE07F6FDF2C4566DEB40999E71DE7E06B3F036F87C09BD19E3C4B41685A25F0502D285C112A47BBDBEFF7F8B0460A5391F818604BC1E4FCFD7CCF-E079F81DEE084DA6603A319181F03F8E08938608C11820577EFC1819C90B47C0839C77182A-1989381A370448C09779B03DB410
				NC				%N	1000001510202:0C.050D.013803.39.031D.041E.021F02-.B7E43E1B3AF1A9C1C68E4D661D967FCDE6B0CF3C1F2B56D2BC1F96E7C192195CF6615E15CF06BD9E4C-C3CD204B9CF1A9A0494E337AB7B255D5D43C1FFE5EF1B9068923C1EB7AF405AAF068F0ADDB9BC6D6674A784B3276C991E0EE34BA689A0741A11A9E113B41A3C51E129CF07DAF06AE396FF5A980
				NG				%N	1000001510202:3003.31.0319.040D.011C.021D02-0F.05.B764361ACB43742B42389D0868362EFC34723DA0EF1FDD1279CD08D07B1B77E1AF14B919B73827-99F42B3420D0A9CFEF342B42A3C1CE7F8707E7F9F27FF2CA5227FC8E30E4FE7F4FDFDD076BC4E847BA12BD80B54CB741FC6DAF4CC04E307E8E3178E70994B41A3F39CE139E8FCE07D0866832E83BC5A0F3257DEE52.
				NU				%N	1000001510202:0C.051A.031B02-1C.041D.021E.017C03.7D.0A3F.07.EEB90B86627AD7EFE1627B2A924723F3097EAFCD7E32FDD6D5611611CDAFB7776A960CDA951FD584160CDF9F3E24031B1EF47021F3634EC5028A9FD39193B5D2FE56F10AEA9CFBF468ED1D4A1ACC6089EFBD41A7103D86186638C7B5160C9C092C1B8B06E98433DF78DE6BDF6981D997D6E3C0
				TRANSITIONS			%N	1000001510208.031202-2603.27.0405.0206.0107:.A2902864F91853E2850EB8F42961-DF7FFD052052F7C89D404E034FEAA9EDBB428A7D2F5C9E251EFD-F4D102D322A7DD60C7B7FB947F77F4194093FBF3322C8156.55BA9FE558FEF9257559FEBAEBBF70CFDFFECD1EEFEEFB8EC40AE753D8AA2ECEF3.
				TRANSVERSIONS			%N	1000001510202.011803.1902-0D.0207:.264261AC8272363FDEBBF17327C79060B67DF9275B56D3-A159FDA37F67D39061E9F7E5E07D65A6F66240FDFB2D-DF95D517DE1DAE40E952067B2FF68BEFDBDFB313F3C8252CFBF24452FBF6-52B2DFA9E9DF.
				%) /*FREQUENCIES*/

			data				"............---664--2662440-44-61662664462-----4--4------662440.........442241224552---4444416-46-6-42442664--4-----------4442--4--4------6646606644104441--1-14624616-4---4-4442---4-4---662464422641--1--00205316-0446222444-1-441--6444461--1---6666-1--44-44-44-4---4-2464--4------4646614-4---4-4--6-614604-14415-14444--............---...."
			_CATEGORIES			"1.000000 0.707107 0.500000 0.353553 0.250000 0.176777 0.125000 "
			%) /*ali_dna*/

		showsec				%i 0
		%) /*extended*/

	extended			%$ (%
		name			:7000	"markerline"
		ali_dna				%% (%
			bits				%I	"------------++++-+++++++++-++++---+---++--++++++++++++++++++-+-+++++++++++++--++++++++++------++++++++--+--++++++++++++++++---++-+++++++++--+-+----++-+++++++++----+-+++++++++--++++++++++---++-+-+++-++-++--+-+++++--++---++++++---+++++--+-+++++++++++-++++++++++++++++++--++++++++++-+-+-++++++++++++++--++-+++++-++-++++++------------+++----"
			_TYPE				"FMX: Filter by Maximum Frequency: Start 0; Stop 336; Minhom 60%; Maxhom 100%"
			%) /*ali_dna*/

		ali_prot			%% (%
			bits				%I	"----+-++-+----+++++++++++--++---++--+++++--+++---++++--+++-+++-+-++-+++--++-+--++-++++++--+++--++++-++++++----+-"
			_TYPE				"FMX: Filter by Maximum Frequency: Start 0; Stop 112; Minhom 60%; Maxhom 100%"
			%) /*ali_prot*/

		%) /*extended*/

	extended			%% (%
		name				"mf_translated"
		ali_dna				%% (%
			data				"................................................................................................................................................................................................................................................................................................................................................."
			_TYPE				"CalcSAI: MAX_FREQUENCY | Translator: default='.'"
			%) /*ali_dna*/

		%) /*extended*/

	extended			%% (%
		name				"markerline_aci"
		ali_dna				%% (%
			data				"------------xxxx-xxxxxxxxx-xxxx---x---xx--xxxxxxxxxxxxxxxxxx-x-xxxxxxxxxxxxx--xxxxxxxxxx------xxxxxxxx--x--xxxxxxxxxxxxxxxx---xx-xxxxxxxxx--x-x----xx-xxxxxxxxx----x-xxxxxxxxx--xxxxxxxxxx---xx-x-xxx-xx-xx--x-xxxxx--xx---xxxxxx---xxxxx--x-xxxxxxxxxxx-xxxxxxxxxxxxxxxxxx--xxxxxxxxxx-x-x-xxxxxxxxxxxxxx--xx-xxxxx-xx-xxxxxx------------xxx----"
			_TYPE				"CalcSAI: markerline | ACI: aci='translate(\"01\",\"-x\")'"
			%) /*ali_dna*/

		%) /*extended*/

	extended			%% (%
		name				"markerline_clone"
		ali_dna				%% (%
			bits				%I	"++++++++++++----+---------+----+++-+++--++------------------+-+-------------++----------++++++--------++-++----------------+++--+---------++-+-++++--+---------++++-+---------++----------+++--+-+---+--+--++-+-----++--+++------+++-----++-+-----------+------------------++----------+-+-+--------------++--+-----+--+------++++++++++++---++++"
			_TYPE				"CalcSAI: markerline | ACI: aci='translate(\"01\",\"10\")'"
			%) /*ali_dna*/

		ali_prot			%% (%
			bits				%I	"++++-+--+-++++-----------++--+++--++-----++---+++----++---+---+-+--+---++--+-++--+------++---++----+------++++-+"
			_TYPE				"CalcSAI: markerline | ACI: aci='translate(\"01\",\"10\")'"
			%) /*ali_prot*/

		%) /*extended*/

	extended			%% (%
		name				"pvp_mix_marker1"
		ali_dna				%% (%
			data				"------------11121211222222-12211112111221111111211211111122212-11111111122221122222211121111111221212211211211211111111111211111111211111111212-11122-22221121211112121211121211211121211111122121222111111--2-22221-12211122212111111222112111211122221111221221221211121211211211111112121221211121211211122-212221211222211------------111----"
			_TYPE				"CalcSAI: markerline+POS_VAR_BY_PARSIMONY | ACI: aci='remove(\"-=.0\")|len|srt(0=-)'"
			%) /*ali_dna*/

		%) /*extended*/

	extended			%% (%
		name				"pvp_mix_marker3"
		ali_dna				%% (%
			data				"------------11121211222222-12211112111221111111211211111122212-11111111122221122222211121111111221212211211211211111111111211111111211111111212-11122-22221121211112121211121211211121211111122121222111111--2-22221-12211122212111111222112111211122221111221221221211121211211211111112121221211121211211122-212221211222211------------111----"
			_TYPE				"CalcSAI: markerline+POS_VAR_BY_PARSIMONY | ACI: aci='remove(\"-=.0\")|len|srt(0=-)'"
			%) /*ali_dna*/

		%) /*extended*/

	extended			%% (%
		name				"ml_cons1"
		ali_prot			%% (%
			data				"------------------1--------1----11------1----------------------1-----11---------------------1-------1-----------"
			_TYPE				"CalcSAI: markerline+CONSENSUS | ACI: aci='count(atAT);head(1)|mult|srt(0=-)'"
			%) /*ali_prot*/

		%) /*extended*/

	extended			%% (%
		name				"ml_cons3"
		ali_dna				%% (%
			data				"------------11---1111-1----1--1---1----1----1-1-11--11--1--1------------11-1--11-------1-------1--1--1--1--1--1-1111--11------11-1--11--11--1-1-----------11-1-----1-11-11--1---11---1---1--------1-1--1-------1--1---1-------------11-11--1------1-1111--1-------------11---1-1--11--1-1---1-1---1---11-1------1--1-11-----1-------------111----"
			_TYPE				"CalcSAI: markerline+CONSENSUS | ACI: aci='count(atAT);head(1)|mult|srt(0=-)'"
			%) /*ali_dna*/

		ali_prot			%% (%
			data				"------------------1--------1----11------1----------------------1-----11---------------------1-------1-----------"
			_TYPE				"CalcSAI: markerline+CONSENSUS | ACI: aci='count(atAT);head(1)|mult|srt(0=-)'"
			%) /*ali_prot*/

		%) /*extended*/

	extended			%% (%
		name				"cloned_ml_cons1"
		ali_prot			%% (%
			data				"--------------1----1----------------1------------------------1------------------1---------------1---------------"
			_TYPE				"CalcSAI: markerline+CONSENSUS | ACI: aci='count(gcGC);head(1)|mult|srt(0=-)'"
			%) /*ali_prot*/

		%) /*extended*/

	extended			%% (%
		name				"cloned_markerline_aci"
		ali_dna				%% (%
			data				"--------------11-----1-1--------------1---11-1-----1--11-11--1------------1-----1111----------1-11-11-------11-1----11--11--------1---11-------------------------------1--1-------11---11----11-1--1--1---------11-1---1------1-1-----1------11-11-1-----1---1--1--1------1---1--1--11----1-----11--1---1---11-1-11----------1-------------------"
			_TYPE				"CalcSAI: markerline+CONSENSUS | ACI: aci='count(gcGC);head(1)|mult|srt(0=-)'"
			%) /*ali_dna*/

		%) /*extended*/

	extended			%% (%
		name				"ml_cons4"
		ali_dna				%% (%
			data				"------------11---1111-1----1--1---1----1----1-1-11--11--1--1------------11-1--11-------1-------1--1--1--1--1--1-1111--11------11-1--11--11--1-1-----------11-1-----1-11-11--1---11---1---1--------1-1--1-------1--1---1-------------11-11--1------1-1111--1-------------11---1-1--11--1-1---1-1---1---11-1------1--1-11-----1-------------111----"
			_TYPE				"CalcSAI: markerline+CONSENSUS | ACI: aci='count(atAT);head(1)|mult|srt(0=-)'"
			%) /*ali_dna*/

		ali_prot			%% (%
			data				"------------------1--------1----11------1----------------------1-----11---------------------1-------1-----------"
			_TYPE				"CalcSAI: markerline+CONSENSUS | ACI: aci='count(atAT);head(1)|mult|srt(0=-)'"
			%) /*ali_prot*/

		%) /*extended*/

	%) /*extended_data*/