/*ARBDB ASCII*/ species_data %% (% species %% (% ali_16s %% (% data :7000 ".........AUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAGCACAGAGGAGCUUGCUCCUCGGGUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGGAUCUGCCCGGUAGAGGGGGAUAACCACUGGAAACGGUGGCUAAUACCGCAUAAUCUCGCAAGAGCAAAGUGGGGGACCUUCGGGCCUCACACUACCGGAUGAACCCAGAUGGGAUUAGCCAGCUGGUGAGGUAACGGCUCACCAGGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGUGAAGAGCGAAUAACUUUUCACAUUGACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUCUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCCGGGAACUGCAUUUGAAACUGGCAGGCUUGAGUCUCGUAGAGGGGGGUGGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCGAUUUGGAGGCUGUGAGCUUGACUCGUGGCUUCCGUAGCUAACGCGUUAAAUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAUCGGGCAGAGAUGCCUGAGUGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCGAUUCGG-UCGGGAACUCAAAGGAGACUGCCGGUGAUAAACCGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUCGGAGUCUGCAACCCGACUCCGUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUA" %) /*ali_16s*/ name :7600 "ErwOleae" full_name "Erwinia oleae" acc "GU810925" tax_slv "Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Erwinia;" start %i 1 stop %i 1494 version %i 1 tax_embl "Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Erwinia;" tax_embl_name "Erwinia oleae" tax_greengenes "k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacteriales;f__Enterobacteriaceae;g__Erwinia;s__oleae;" tax_greengenes_name "Erwinia oleae" tax_ltp "Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Erwiniaceae;Erwinia" tax_ltp_name "Erwinia oleae" tax_rdp "Bacteria;\"Proteobacteria\";Gammaproteobacteria;\"Enterobacteriales\";Enterobacteriaceae;Erwinia;" tax_rdp_name "Erwinia oleae" align_bp_score_slv %i 120 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 94.846054 align_quality_slv %i 97 aligned_slv "2018-03-21 15:49:39" ambig_slv %f 0 ann_src_slv "EMBL; RDP; RNAmmer;" author "Moretti C.; Hosni T.; Vandemeulebroecke K.; Brady C.; De Vos P.; Buonaurio R.; Cleenwerck I.; ; " culture_collection "LMG:25322" date "2010-06-27; 2013-12-12;" description "Erwinia oleae strain DAPP-PG 531 16S ribosomal RNA gene, partial sequence." embl_class "Standard" embl_division "Prokaryotes" homop_slv %f 0.4 homop_events_slv %i 5 journal "Int. J. Syst. Evol. Microbiol. 61:2745-2752 (2011)" nuc_gene_slv %i 1494 nuc_region "1..1494" nuc_rp "1-1494" pintail_slv %i 100 pcr_primers "fwd_name: 16F27, fwd_seq: agagtttgatcctggctcag, rev_name: 16R1522, rev_seq: aaggaggtgatccagccgca" pubmed_id "21186287" seq_quality_slv %i 93 strain "DAPP-PG 531 l[T] r[T] s[T]" submit_author "Moretti C.; Hosni T.; Vandemeulebroecke K.; De Vos P.; Buonaurio R.; Cleenwerck I.; ; " submit_date "15-FEB-2010 Dipartimento Scienze Agrarie e Ambientali, Universita degli Studi di Perugia, Borgo XX Giugno 74, Perugia, Perugia 06121, Italy" tax_xref_embl "796334" title "Erwinia oleae sp. nov., isolated from olive knots caused by Pseudomonas savastanoi pv. savastanoi" vector_slv %f 0 ARB_color %i 12 fullname_ltp "Erwinia oleae" hi_tax_ltp "Erwiniaceae" phyl_ltp "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Enterobacterales, Pasteurellales and Orbales/Erwiniaceae" rel_ltp "s108" url_lpsn_ltp "http://www.bacterio.net/erwinia.html" align_family_slv "AJ508775.1:0.94 AF530476.1:0.93 AB519796.1:0.92 AF366378.1:0.9 FR729477.2849087:0.9 AF366380.1:0.9 AJ627597.1:0.9 AF366379.1:0.9 AF366375.1:0.9 AF366377.1:0.9 AF366381.1:0.9 AF366376.1:0.9 AF366383.1:0.89 AM182404.1:0.89 AF366384.1:0.89 EF488079.1:0.87 AJ316181.1:0.87 GU929924.1:0.87 FJ009624.1:0.86 AB428909.1:0.86 AB428897.1:0.86 AJ345063.1:0.86 X99762.1:0.86 AJ630103.7:0.86 DQ451211.1:0.86 LC004912.1:0.86 KM099166.1:0.86 JQ434120.1:0.86 AJ421444.1:0.86 KF487035.1:0.85 AF388386.1:0.85 GU929925.1:0.85 JF316656.1:0.85 X99761.1:0.85 GU078672.1:0.85 JQ434105.1:0.85 AJ316171.1:0.85 KP342514.1:0.85 X76335.1:0.85 X76337.1:0.85 " align_filter_slv "" align_log_slv "scoring: raw=-4041.98, weight=-4136.19, query-len=1494, aligned-bases=1494, score=0.977221; " align_startpos_slv %i 1043 align_stoppos_slv %i 43255 nuc %i 1494 turn_slv "none" riskgroup_ltp "1" ARB_treetax "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Enterobacterales, Pasteurellales and Orbales/Erwiniaceae" %) /*species*/ species %% (% ali_16s %% (% data :7000 "..............ACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAGCAGAAAGAAGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCCGAUGGAGGGGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAACGUCUUCGGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUGAGGUUAAUAACCUCANUCAUUGACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUCUGUCAAGUCGGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUUCGAAACUGGCAGGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCUACUUGGAGGCUGUGGUCUUGAACCGUGGCUUCCGGAGCUAACGCGUUAAGUAGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUACUCUUGACAUCCAGAGAACUUAGCAGAGAUGCUUUGGUGCCUUCGGGAACUCUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGG-CCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGAGUAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUG................." %) /*ali_16s*/ name :7600 "PurGergo" full_name "Pluralibacter gergoviae" acc "AB004748" tax_slv "Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pluralibacter;" start %i 1 stop %i 1450 version %i 1 tax_embl "Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Pluralibacter;" tax_embl_name "Pluralibacter gergoviae" tax_greengenes "k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacteriales;f__Enterobacteriaceae;" tax_greengenes_name "Pluralibacter gergoviae" tax_ltp "Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pluralibacter" tax_ltp_name "Pluralibacter gergoviae" tax_rdp "Bacteria;\"Proteobacteria\";Gammaproteobacteria;\"Enterobacteriales\";Enterobacteriaceae;Pluralibacter;" tax_rdp_name "Pluralibacter gergoviae" align_bp_score_slv %i 117 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 97.172417 align_quality_slv %i 99 aligned_slv "2018-03-21 15:49:26" ambig_slv %f 0.07 ann_src_slv "EMBL; RDP; RNAmmer;" author "Harada H.; Oyaizu H.; Ishikawa H.; ; " date "1997-06-22; 2008-12-13;" description "Enterobacter gergoviae gene for 16S ribosomal RNA, partial sequence." embl_class "Standard" embl_division "Prokaryotes" homop_slv %f 0.41 homop_events_slv %i 5 journal "J. Gen. Appl. Microbiol. 42:17-26 (1996)" nuc_gene_slv %i 1450 nuc_region "1..1450" nuc_rp "1-1450" pintail_slv %i 100 seq_quality_slv %i 91 strain "JCM1234 l[T] r[T] s[T]" submit_author "Harada H.; Oyaizu H.; Ishikawa H.; ; " submit_date "09-JUN-1997 Contact:Hosami Harada Graduate School of Science, University of Tokyo, Department of Biological Sciences; Hongo, Bunkyo-ku, Tokyo 113, Japan, Bunkyo-ku, Tokyo 113, Japan" tax_xref_embl "61647" title "A consideration about the origin of aphid intracellular symbiont in connection with gut bacterial flora" vector_slv %f 0 ARB_color %i 10 fullname_ltp "Pluralibacter gergoviae" hi_tax_ltp "Enterobacteriaceae" phyl_ltp "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Enterobacterales, Pasteurellales and Orbales" type_ltp "type sp." rel_ltp "s93" riskgroup_ltp "2" url_lpsn_ltp "http://www.bacterio.net/pluralibacter.html" align_family_slv "AB519796.1:0.96 AF530476.1:0.96 AJ508775.1:0.96 AF366378.1:0.92 FR729477.2849087:0.92 AF366381.1:0.92 AF366380.1:0.92 AF366379.1:0.92 AF366376.1:0.91 AF366383.1:0.91 AF366384.1:0.91 AM182404.1:0.91 AF366377.1:0.91 AJ627597.1:0.91 AF366375.1:0.91 EF488079.1:0.9 JQ434105.1:0.89 GU929925.1:0.89 AB428909.1:0.89 AB428897.1:0.89 FJ009624.1:0.89 GU929924.1:0.89 X76335.1:0.89 AJ421444.1:0.89 AJ630103.7:0.89 X99762.1:0.89 AJ345063.1:0.89 EF599161.1:0.89 KF487035.1:0.89 KM099166.1:0.89 AB000390.1:0.89 DQ451211.1:0.89 GU078672.1:0.88 AF388386.1:0.88 JQ434120.1:0.88 KP342514.1:0.88 LC004912.1:0.88 JF316656.1:0.88 X99761.1:0.88 AJ316181.1:0.88 " align_filter_slv "" align_log_slv "scoring: raw=-4066.25, weight=-4083.19, query-len=1450, aligned-bases=1450, score=0.99585; " align_startpos_slv %i 1055 align_stoppos_slv %i 43096 nuc %i 1450 turn_slv "none" ARB_treetax "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Enterobacterales, Pasteurellales and Orbales" %) /*species*/ species %% (% ali_16s %% (% data :7000 ".........AUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAGCGGCAGCGGGAAGUAGUUUACUACUUUGCCGGCGAGCGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUGACCUCGCAAGAGCAAAGUGGGGGACCUUCGGGCCUCACGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAAUGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGUGUGUGAAGAAGGCCUUCGGGUUGUAAAGCACUUUCAGCGAGGAGGAAGGGUUCAGUGUUAAUAGCACUGAGCAUUGACGUUACUCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGCGCUUAACGUGGGAACUGCAUUUGAAACUGGCAAGCUAGAGUCUUGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACAAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCUGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUACUCUUGACAUCCACAGAACUUAGCAGAGAUGCUUCGGUGCCUUCGGGAACUGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCACGUAAUGGUGGGAACUCAAGGGAGACUGCCGGUGACAAACCGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGAGUAGGGCUACACACGUGCUACAAUGGCAGAUACAAAGUGAAGCGAACUCGCGAGAGCAAGCGGACCACAUAAAGUCUGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUAGAUCAGAAUGCUACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGG............" %) /*ali_16s*/ name :7600 "YerKrist" full_name "Yersinia kristensenii" acc "AF366381" tax_slv "Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia;" start %i 1 stop %i 1461 version %i 1 tax_embl "Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacterales;Yersiniaceae;Yersinia;" tax_embl_name "Yersinia kristensenii" tax_greengenes "k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacteriales;f__Enterobacteriaceae;g__Yersinia;" tax_greengenes_name "Yersinia kristensenii" tax_ltp "Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Yersiniaceae;Yersinia" tax_ltp_name "Yersinia kristensenii" tax_rdp "Bacteria;\"Proteobacteria\";Gammaproteobacteria;\"Enterobacteriales\";Enterobacteriaceae;Yersinia;" tax_rdp_name "Yersinia kristensenii" align_bp_score_slv %i 118 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 99.247093 align_quality_slv %i 99 aligned_slv "2018-03-21 15:48:34" ambig_slv %f 0 ann_src_slv "EMBL; RDP; RNAmmer;" author "Kim W.; Song M.-O.; Song W.; Kim K.-J.; Chung S.-I.; Choi C.-S.; Park Y.-H.; ; " date "2001-05-09; 2003-10-11;" description "Yersinia kristensenii 16S ribosomal RNA gene, partial sequence." embl_class "Standard" embl_division "Prokaryotes" homop_slv %f 0.41 homop_events_slv %i 5 journal "Antonie Van Leeuwenhoek 83:125-133 (2003)" nuc_gene_slv %i 1461 nuc_region "1..1461" nuc_rp "1-1461" pintail_slv %i 95 publication_doi "10.1023/A:1023301924932" pubmed_id "12785306" seq_quality_slv %i 93 strain "ATCC 33638 l[T] r[T] s[T]" submit_author "Kim W.; ; " submit_date "30-MAR-2001 Department of Microbiology, Chung-Ang University College of Medicine, 221 Heuksuk-dong DongJak-gu, Seoul 156-756, Republic of Korea" tax_xref_embl "28152" title "Comparison of 16S rDNA analysis and rep-PCR genomic fingerprinting for molecular identification of Yersinia pseudotuberculosis" vector_slv %f 0 ARB_color %i 12 fullname_ltp "Yersinia kristensenii" hi_tax_ltp "Yersiniaceae" phyl_ltp "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Enterobacterales, Pasteurellales and Orbales/Yersiniaceae, Hafniaceae and Budviciaceae" rel_ltp "s93" riskgroup_ltp "2, Z" url_lpsn_ltp "http://www.bacterio.net/yersinia.html" align_family_slv "AF366384.1:0.99 AF366379.1:0.99 AF366376.1:0.99 AF366380.1:0.99 AF366377.1:0.99 AM182404.1:0.98 AF366383.1:0.98 AF366378.1:0.98 AJ627597.1:0.98 AF366375.1:0.98 FR729477.2849087:0.98 AB519796.1:0.93 AF530476.1:0.93 AJ508775.1:0.92 EF488079.1:0.87 EU144014.1:0.87 GU929924.1:0.86 AJ514916.1:0.86 AB428897.1:0.86 AB428909.1:0.86 KP342514.1:0.86 JF316656.1:0.86 EF032499.1:0.86 X76337.1:0.86 AY426980.1:0.86 X99762.1:0.86 AB000390.1:0.86 FN421434.1:0.86 AY426979.1:0.86 GU929925.1:0.86 JQ434105.1:0.86 LC004912.1:0.86 DQ847123.1:0.86 AF462458.1:0.86 AJ630103.7:0.86 AF388386.1:0.86 X76335.1:0.86 KM099166.1:0.86 AJ421444.1:0.86 KC751062.1:0.86 " align_filter_slv "" align_log_slv "scoring: raw=-4110.32, weight=-4120.44, query-len=1461, aligned-bases=1461, score=0.997545; " align_startpos_slv %i 1043 align_stoppos_slv %i 43106 nuc %i 1461 turn_slv "none" ARB_treetax "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Enterobacterales, Pasteurellales and Orbales/Yersiniaceae, Hafniaceae and Budviciaceae" %) /*species*/ species %$ (% ali_16s %% (% data :7000 "...........................GCCUAACACAUGCAAGUCGAGCGGCAGCG-GAAGUAGCUUGCUACUUUGCCGGCGAGCGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCCGAUGGAGGGGGAUAACUACUGGAAACGGUGGCUAAUACCGCAUAACGUCUUCGGACCAAAGUGGGGGACCUUCGGGCCUCACACCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAAUGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGUGUGUGAAGAAGGCCUUCGGGUUGUAAAGCACUUUCAGCGAGGAGGAAGGGUUUGGUGUUAAUAGCACCAUUCAUUGACGUUACUCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGAGCUUAACUUGGGAACUGCAUUUGAAACUGGCAAGCUAGAGUCUUGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACAAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCUGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUACUCUUGACAUCCACGGAAUUUGCUAGAGAUAGCUUAGUGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCACGUGAUGGUGGGAACUCAAAGGAGACUGCCGGUGAUAAACCGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGAGUAGGGCUACACACGUGCUACAAUGGCAUAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUAUGUCGUAGUCCGGAUCGGAGUCUGCAACUCGACUCCGUGAAGUCGGAAUCGCUAGUAAUCGUAGAUCAGAAUGCUACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUA" %) /*ali_16s*/ name :7600 "SrrAquat" full_name "Serratia aquatilis" acc "KT387999" tax_slv "Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia;" start %i 1 stop %i 1454 version %i 1 tax_embl "Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacterales;Yersiniaceae;Serratia;" tax_embl_name "Serratia aquatilis" tax_greengenes "Unclassified;" tax_greengenes_name "Serratia aquatilis" tax_ltp "Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Yersiniaceae;Serratia" tax_ltp_name "Serratia aquatilis" tax_rdp "Bacteria;\"Proteobacteria\";Gammaproteobacteria;\"Enterobacteriales\";Enterobacteriaceae;Serratia;" tax_rdp_name "Serratia aquatilis" align_bp_score_slv %i 115 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 97.569443 align_quality_slv %i 99 aligned_slv "2018-03-21 15:48:31" ambig_slv %f 0 ann_src_slv "EMBL; RDP; RNAmmer;" country "Germany" date "2015-11-10; 2016-06-23;" description "Serratia sp. 2015-2462-01 16S ribosomal RNA gene, partial sequence." embl_class "Standard" embl_division "Prokaryotes" homop_slv %f 0.41 homop_events_slv %i 5 isolation_source "water distribution system" nuc_gene_slv %i 1454 nuc_region "1..1454" nuc_rp "1-1454" pintail_slv %i 100 seq_quality_slv %i 93 strain "2015-2462-01 l[T]" submit_author "Glaeser S.P.; Kaempfer P.; ; " submit_date "12-AUG-2015 Department of Applied Microbiology, Justus-Liebig-University Giessen, Heirich-Buff-Ring 26, Giessen, Hesse 35392, Germany" tax_xref_embl "1737515" vector_slv %f 0 ARB_color %i 12 fullname_ltp "Serratia aquatilis" hi_tax_ltp "Yersiniaceae" phyl_ltp "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Enterobacterales, Pasteurellales and Orbales/Yersiniaceae, Hafniaceae and Budviciaceae" rel_ltp "s128" url_lpsn_ltp "http://www.bacterio.net/serratia.html" align_family_slv "FR729477.2849087:0.96 AF366378.1:0.96 AF366379.1:0.95 AF366380.1:0.95 AF366375.1:0.95 AF366381.1:0.95 AF366376.1:0.95 AM182404.1:0.95 AJ627597.1:0.95 AF366384.1:0.95 AF366383.1:0.95 AF366377.1:0.95 AB519796.1:0.93 AF530476.1:0.93 AJ508775.1:0.92 EF488079.1:0.87 GU929924.1:0.86 EU144014.1:0.86 DQ847123.1:0.86 AY257972.1:0.86 AJ514916.1:0.86 AB428909.1:0.86 AB428897.1:0.86 JF316656.1:0.86 X99762.1:0.86 AY426979.1:0.86 X76337.1:0.86 AY426980.1:0.86 LC004912.1:0.86 KC751062.1:0.85 KP342514.1:0.85 KM099166.1:0.85 AB000390.1:0.85 EF032499.1:0.85 GU929925.1:0.85 AF462458.1:0.85 AF388386.1:0.85 AJ316181.1:0.85 X76335.1:0.85 AJ630103.7:0.85 " align_filter_slv "" align_log_slv "scoring: raw=-4071.28, weight=-4092.84, query-len=1454, aligned-bases=1454, score=0.99473; " align_startpos_slv %i 1084 align_stoppos_slv %i 43215 nuc %i 1454 turn_slv "none" ARB_treetax "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Enterobacterales, Pasteurellales and Orbales/Yersiniaceae, Hafniaceae and Budviciaceae" %) /*species*/ species %% (% ali_16s %% (% data :7000 "AUGGCUCAGAUUGAACGCUGGCGGCAGGCUUAACACAUGCAAGUCGAACGGUAAC-AUGAG-UGCUUGCA-C-UUGAUGACGAGUGGCGGACGGGUGAGUAAAGUAUGGGGAUCUGCCGAAUGGAGGGGGACAACAGUUGGAAACGACUGCUAAUACCGCAUAAAGUUGAGAGACCAAAGCAUGGGACCUUCGGGCCAUGCGCCAUUUGAUGAACCCAUAUGGGAUUAGCUAGUUGGUAGGGUAAUGGCUUACCAAGGCGACGAUCUCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGGGAAACCCUGAUGCAGCCAUGCCGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCGGUGAUGAGGAAGGUGGUGUAUCUAAUAGGUGCAUCAAUUGACGUUAAUUACAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCGAGCGUUAAUCGGAAUGACUGGGCGUAAAGGGCAUGUAGGCGGAUAAUUAAGUUAGGUGUGAAAGCCCUGGGCUCAACCUAGGAAUUGCACUUAAAACUGGUUAACUAGAGUAUUGUAGAGGAAGGUAGAAUUCCACGUGUAGCGGUGAAAUGCGUAGAGAUGUGGAGGAAUACCGGUGGCGAAGGCGGCCUUCUGGACAGAUACUGACGCUGAGAUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCUGUAAACGAUGUCGAUUUGGAGUUUGUUGCCCUGAGUGAUGGGCUCCGAAGCUAACGCGAUAAAUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACAGAAUCUUGCAGAGAUGCGGGAGUGCCUUCGGGAACUGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAUCGGUUAGG-CCGGGAACUCAAAGGAGACUGCCGUUGAUAAAGCGGAGGAAGGUGGGGACGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGUAUACAAAGGGAGGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUACGUCUAAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGAAUCAGAAUGUCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCACCAGAAGUAGAUAGCUUAACCUUCGGGAGGGCGUUUACCACGGUGUGGUCCAUGACUGGGGUGAAGUCGUA" %) /*ali_16s*/ name :7600 "GlmApico" full_name "Gilliamella apicola" acc "JQ936674" tax_slv "Bacteria;Proteobacteria;Gammaproteobacteria;Orbales;Orbaceae;Gilliamella;" start %i 1 stop %i 1538 version %i 2 tax_embl "Bacteria;Proteobacteria;Gammaproteobacteria;Orbales;Orbaceae;Gilliamella;" tax_embl_name "Gilliamella apicola" tax_greengenes "k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;" tax_greengenes_name "Gilliamella apicola" tax_ltp "Bacteria;Proteobacteria;Gammaproteobacteria;Orbales;Orbaceae;Gilliamella" tax_ltp_name "Gilliamella apicola" tax_rdp "Bacteria;\"Proteobacteria\";Gammaproteobacteria;Orbales;Orbaceae;Gilliamella;" tax_rdp_name "Gilliamella apicola" align_bp_score_slv %i 119 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 89.625168 align_quality_slv %i 92 aligned_slv "2018-03-21 15:47:52" ambig_slv %f 0 ann_src_slv "EMBL; RDP; RNAmmer;" author "Kwong W.K.; Moran N.A.; ; " collected_by "W. Kwong" collection_date "25-May-2011" country "USA:West Haven, CT" date "2012-08-19; 2013-06-13;" description "Gilliamella apicola strain wkB1 16S ribosomal RNA gene, complete sequence." embl_class "Standard" embl_division "Prokaryotes" homop_slv %f 0.2 homop_events_slv %i 3 host "Apis mellifera" identified_by "W. Kwong" isolation_source "bee gut" journal "Int. J. Syst. Evol. Microbiol. 63:2008-2018 (2013)" lat_lon "41.26 N 72.99 W" nuc_gene_slv %i 1537 nuc_region "1..1538" nuc_rp "1-1538" pintail_slv %i 100 publication_doi "10.1099/ijs.0.044875-0" pubmed_id "23041637" seq_quality_slv %i 96 strain "wkB1 l[T] r[T] s[T]" submit_author "Kwong W.; Moran N.A.; ; " submit_date "14-APR-2012 Ecology and Evolutionary Biology, Yale University, 21 Sachem Street, New Haven, CT 06520, USA" tax_xref_embl "1196095" title "Cultivation and characterization of the gut symbionts of honey bees and bumble bees: description of Snodgrassella alvi gen. nov., sp. nov., a member of the family Neisseriaceae of the Betaproteobacteria, and Gilliamella apicola gen. nov., sp. nov., a member of Orbaceae fam. nov., Orbales ord. nov., " vector_slv %f 0 ARB_color %i 10 fullname_ltp "Gilliamella apicola" hi_tax_ltp "Orbaceae" phyl_ltp "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Enterobacterales, Pasteurellales and Orbales/Orbales" type_ltp "type sp." rel_ltp "s115" url_lpsn_ltp "http://www.bacterio.net/gilliamella.html" align_family_slv "AJ508775.1:0.87 AM162656.1:0.85 EU143360.1:0.85 AB519796.1:0.85 AM162657.1:0.85 EF599161.1:0.85 DQ922920.1:0.85 EF094888.1:0.85 X76335.1:0.84 AF530476.1:0.84 Y08430.1:0.84 FR729477.2849087:0.84 AY155585.1:0.84 AM182404.1:0.84 EU144014.1:0.84 GU929924.1:0.84 X74705.1:0.84 EF488079.1:0.84 EU541605.1:0.84 EF599164.1:0.84 HE978310.1:0.84 EF599163.1:0.84 KF487035.1:0.84 AF366375.1:0.84 AF366383.1:0.84 AF366377.1:0.84 FJ009624.1:0.84 X74701.1:0.84 DQ922915.1:0.84 AJ627597.1:0.84 AF366381.1:0.84 AF366379.1:0.84 AF366376.1:0.84 AF366384.1:0.84 AF366378.1:0.84 AF366380.1:0.84 AJ630103.7:0.84 JQ434120.1:0.84 DQ914239.1:0.84 FN421434.1:0.84 " align_filter_slv "" align_log_slv "scoring: raw=-3877.15, weight=-4195.65, query-len=1538, aligned-bases=1538, score=0.924088; " align_startpos_slv %i 999 align_stoppos_slv %i 43282 nuc %i 1538 turn_slv "none" riskgroup_ltp "1" ARB_treetax "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Enterobacterales, Pasteurellales and Orbales/Orbales" %) /*species*/ species %% (% ali_16s %% (% data :7000 ".........AUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAGCGGAAACGACUGAACCYUCGGGGRACGGGCGUCGAGCGGCGGACGGGUGAGUAAUGCCUGGGAAAUUGCCCUGAUGUGGGGGAUAACCAUUGGAAACGAUGGCUAAUACCGCAUAAUAGCUUCGGCUCAAAGAGGGGGACCUUCGGGCCUCUCGCGUCAGGAUAUGCCCAGGUGGGAUUAGCUAGUUGGUGAGGUAAGGGCUCACCAAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGAUCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGYMGUGAGGAAGGURGKGKWGUUAAUAGCWSCWUYAUUUGACGUUAGCKRCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCGAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCAUGCAGGUGGUGUGUUAAGUCAGAUGUGAAAGCCCGGGGCUCAACCUCGGAAUAGCAUUUGAAACUGGCAGACUAGAGUACUGUAGAGGGGGGUAGAAUUUCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGAAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACAGAUACUGACACUCAGAUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCUACUUGGAGGUUGUGGCCUUGAGCCGUGGCUUUCGGAGCUAACGCGUUAAGUAGACCGCCUGGGGAGUACGGUCGCAAGAUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUACUCUUGACAUCCAGAGAACUUUCCAGAGAUGGAUUGGUGCCUUCGGGAACUCUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUGUUUGCCAGCACUUCGG-GUGGGAACUCCAGGGAGACUGCCGGUGAUAAACCGGAGGAAGGUGGGGACGACGUCAAGUCAUCAUGGCCCUUACGAGUAGGGCUACACACGUGCUACAAUGGCGCAUACAGAGGGCGGCCAACUUGCGAGAGUGAGCGAAUCCCAAAAAGUGCGUCGUAGUCCGGAUCGGAGUCUGCAACUCGACUCCGUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGCUGCAAAAGAAGUAGGUAGUUUAACCUUCGGGAGGACGCUUACCACUUUGUGGUUCAUGACUGGGGUGAAG....." %) /*ali_16s*/ name :7600 "VibJapon" full_name "Vibrio japonicus" acc "LC143378" tax_slv "Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio;" start %i 1 stop %i 1477 version %i 1 tax_embl "Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio;" tax_embl_name "Vibrio japonicus" tax_greengenes "Unclassified;" tax_greengenes_name "Vibrio japonicus" tax_ltp "Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio" tax_ltp_name "Vibrio japonicus" tax_rdp "Unclassified;" tax_rdp_name "Vibrio japonicus" align_bp_score_slv %i 116 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 99.170128 align_quality_slv %i 99 aligned_slv "2018-03-21 15:46:46" ambig_slv %f 1.22 ann_src_slv "EMBL; RNAmmer;" author "Doi H.; Osawa I.; Adachi H.; Kawada M.; ; " collected_by "Hiroyasu Doi" collection_date "2013-10-09" country "Japan:Hyogo, Ako" date "2016-04-07; 2017-03-01;" description "Vibrio japonicus gene for 16S ribosomal RNA, partial sequence." embl_class "Standard" embl_division "Prokaryotes" homop_slv %f 0.47 homop_events_slv %i 6 isolation_source "sea water" journal "PLoS One 12:e0172164-e0172164 (2017)" lat_lon "34.75 N 134.38 E" nuc_gene_slv %i 1477 nuc_region "1..1477" nuc_rp "1-1477" pintail_slv %i 95 pubmed_id "28231272" seq_quality_slv %i 71 strain "Bio7-2" submit_author "Doi H.; ; " submit_date "31-MAR-2016 Contact:Hiroyasu Doi Institute of Microbial Chemistry, Numazu Branch; 18-24 Miyamoto, Numazu, Shizuoka 410-0301, Japan URL :http://bikaken.or.jp" tax_xref_embl "1824638" title "Vibrio japonicus sp. nov., a novel member of the Nereis clade in the genus Vibrio isolated from the coast of Japan" vector_slv %f 0 rel_ltp "s132" fullname_ltp "Vibrio japonicus" ARB_color %i 12 align_family_slv "AJ316181.1:0.98 AJ345063.1:0.98 X74723.1:0.97 X99762.1:0.97 DQ451211.1:0.97 AB428897.1:0.97 FJ009624.1:0.97 X99761.1:0.96 GU078672.1:0.96 AB428909.1:0.96 LC004912.1:0.96 KM099166.1:0.96 AF388386.1:0.96 JF316656.1:0.96 AJ316171.1:0.96 GU929925.1:0.96 X76335.1:0.96 AJ421444.1:0.96 JQ434120.1:0.95 X74717.1:0.95 GU929924.1:0.95 EU143360.1:0.95 X74716.1:0.95 KP342514.1:0.95 AJ630103.7:0.95 AJ316194.1:0.95 JQ434105.1:0.95 AB013297.1:0.95 EF599161.1:0.95 KF487035.1:0.95 X74701.1:0.95 Y08430.1:0.94 KC751062.1:0.94 AY155585.1:0.94 AJ514916.1:0.94 Y13830.1:0.94 AY426979.1:0.94 AY426980.1:0.94 DQ922915.1:0.94 AY254040.1:0.94 " align_filter_slv "" align_log_slv "scoring: raw=-4251.85, weight=-4255.1, query-len=1477, aligned-bases=1477, score=0.999236; " align_startpos_slv %i 1043 align_stoppos_slv %i 43182 nuc %i 1477 turn_slv "none" hi_tax_ltp "Vibrionaceae" url_lpsn_ltp "http://www.bacterio.net/vibrio.html" phyl_ltp "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Vibrionaceae" ARB_treetax "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Vibrionaceae" %) /*species*/ species %$ (% ali_16s %% (% data :7000 "AUGGCUCAGAUUGAACGCUGGCGGUAUGCUUAACACAUGCAAGUCGAACGGUAGCAG---G-CCUUCGGG-C---GCUGACGAGUGGCGGACGGGUGAGUAAUGCAUAGGAAUCUGCCUCAUAGUGGGGGAUAACGUGGGGAAACUCACGCUAAUACCGCAUACGACCUACGGGUGAAAGCGGGGGACCUUCGGGCCUCGCGCUAUGAGAUGAGCCUAUGUUGGAUUAGCUAGUUGGUAGGGUAAUGGCCUACCAAGGCGACGAUCCAUAGCUGGUCUGAGAGGAUGAUCAGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGGACAAUGGGCGGAAGCCUGAUCCAGCAAUACCGCGUGUGUGAAGAAGGCCUGAGGGUUGUAAAGCACUUUCAAUGGGAAGGAAUACCUAUCGGCGAAUACCCGGUAGA-CUGACAUUACCCAUACAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGUGCGUAGGCGGUGAUUUAAGUCAGAUGUGAAAGCCCUGGGCUUAACCUGGGAACUGCAUUUGAUACUGGGUCACUAGAGUUGAGUAGAGGAGAGUGGAAUUUCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGAAGGAACACCAGUGGCGAAGGCGGCUCUCUGGACUCAAACUGACGCUGAGGUACGAAAGCGUGGGUAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCAACUAACCGUUGGGUUCUUAAAGAACUUAGUGGUGGAGCUAACGUAUUAAGUUGACCGCCUGGGGAGUACGGCCGCAAGGCUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUACCCUUGACAUCCAGAGAAUCUGUUAGAGAUAGCGGAGUGCCUUCGGGAACUCUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGUAACGAGCGCAACCCUUAUCCUUAGUUGCCAACAGUUCGG-CUGGGAACUCUAGGGAGACUGCCGGUGAUAAACCGGAGGAAGGUGGGGACGACGUCAAGUCAUCAUGGCCCUUAUGGGUAGGGCUACACACGUGCUACAAUGGCCGGUACAGAGGGCAGCAAACUCGCGAGAGCCAGCAAAUCCCAAAAAGCCGGUCCUAGUCCGGAUUGCAGUCUGCAACUCGACUGCAUGAAGUCGGAAUCGCUAGUAAUCGCGGAUCAGAAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGUUUAACCUUCGGGAGGGCGC....................................." %) /*ali_16s*/ name :7600 "MhyPalud" full_name "Methylomonas paludis" acc "HE801216" tax_slv "Bacteria;Proteobacteria;Gammaproteobacteria;Methylococcales;Methylomonaceae;Methylomonas;" start %i 1 stop %i 1435 version %i 1 tax_embl "Bacteria;Proteobacteria;Gammaproteobacteria;Methylococcales;Methylococcaceae;Methylomonas;" tax_embl_name "Methylomonas paludis" tax_greengenes "k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylomonas;" tax_greengenes_name "Methylomonas paludis" tax_ltp "Bacteria;Proteobacteria;Gammaproteobacteria;Methylococcales;Methylococcaceae;Methylomonas" tax_ltp_name "Methylomonas paludis" tax_rdp "Bacteria;\"Proteobacteria\";Gammaproteobacteria;Methylococcales;Methylococcaceae;Methylomonas;" tax_rdp_name "Methylomonas paludis" align_bp_score_slv %i 112 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 87.470451 align_quality_slv %i 92 aligned_slv "2018-03-21 15:43:51" ambig_slv %f 0 ann_src_slv "EMBL; RDP; RNAmmer;" author "Danilova O.V.; Kulichevskaya I.S.; Rozova O.N.; Detkova E.N.; Bodelier P.L.; Trotsenko Y.A.; Dedysh S.N.; ; " country "Russia:Karelia, Valaam, bank of the peat bog lake Germanovskoe" date "2012-04-13; 2015-10-01;" description "Methylomonas paludis partial 16S rRNA gene, type strain DSM 24973T" embl_class "Standard" embl_division "Prokaryotes" gene "16S rRNA" homop_slv %f 0.28 homop_events_slv %i 4 isolation_source "Sphagnum peat" journal "Int. J. Syst. Evol. Microbiol. 63:2282-2289 (2013)" lat_lon "61.22 N 31.07 E" nuc_gene_slv %i 1435 nuc_region "1..1435" nuc_rp "1-1435" pintail_slv %i 100 publication_doi "10.1099/ijs.0.045658-0" pubmed_id "23159751" seq_quality_slv %i 95 strain "type strain: DSM 24973 l[T] r[T] s[T]" submit_author "Dedysh S.; ; " submit_date "06-APR-2012 Winogradsky Institute of Microbiology, Department of Microbial Communities, Prospect 60-Letya Octyabrya 7/2, Moscow, 117312, RUSSIA." tax_xref_embl "1173101" title "Methylomonas paludis sp. nov., the first acid-tolerant member of the genus Methylomonas, from an acidic wetland" vector_slv %f 0 ARB_color %i 12 fullname_ltp "Methylomonas paludis" hi_tax_ltp "Methylococcaceae" phyl_ltp "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Other Methylococcales" rel_ltp "s115" url_lpsn_ltp "http://www.bacterio.net/methylomonas.html" align_family_slv "AB013297.1:0.83 FJ968722.1:0.83 DQ097523.1:0.83 LN846833.1:0.83 JQ434120.1:0.82 GU078672.1:0.82 EF032499.1:0.82 X76337.1:0.82 AJ345063.1:0.82 LC004912.1:0.81 AY257972.1:0.81 JF316656.1:0.81 AF388386.1:0.81 AJ421444.1:0.81 AJ316194.1:0.81 GU929924.1:0.81 X74713.1:0.81 Y08430.1:0.81 X99762.1:0.81 AJ316181.1:0.81 X74698.1:0.81 AB428897.1:0.81 AB428909.1:0.81 AM162656.1:0.81 KM099166.1:0.81 FJ009624.1:0.81 EU144014.1:0.81 AY426979.1:0.81 AY155585.1:0.81 X76335.1:0.81 JQ434105.1:0.8 AJ514916.1:0.8 AY426980.1:0.8 KP342514.1:0.8 EF599161.1:0.8 GU929925.1:0.8 AM162657.1:0.8 EF488079.1:0.8 AB000390.1:0.8 DQ922915.1:0.8 " align_filter_slv "" align_log_slv "scoring: raw=-3642.42, weight=-3931.15, query-len=1435, aligned-bases=1435, score=0.926555; " align_startpos_slv %i 1026 align_stoppos_slv %i 43009 nuc %i 1435 turn_slv "none" riskgroup_ltp "1" ARB_treetax "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Other Methylococcales" %) /*species*/ species %% (% ali_16s %% (% data :7000 "CUGGCUCAGAUUGAACGCUGGCGGCAUGCCUUACACAUGCAAGUCGAACGGCAGCAC---GGGGGCAACCCU---GGUGGCGAGUGGCGAACGGGUGAGUAAUACAUCGGAACGUGUCCUGUAGUGGGGGAUAGCCCGGCGAAAGCCGGAUUAAUACCGCAUACGACCUAAGGGAGAAAGCGGGGGAUCUUCGGACCUCGCGCUAUAGGGGCGGCCGAUGGCAGAUUAGCUAGUUGGUGGGGUAAAGGCCUACCAAGGCGACGAUCUGUAGCUGGUCUGAGAGGACGACCAGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUUUUGGACAAUGGGGGCAACCCUGAUCCAGCAAUGCCGCGUGUGUGAAGAAGGCCUUCGGGUUGUAAAGCACUUUUGUCCGGAAAGAAAACUUCGCCGCUAAUAUCGGUGGAGGAUGACGGUACCGGAAGAAUAAGCACCGGCUAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGGUGCGAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGUGCGCAGGCGGUCUGUUAAGACCGAUGUGAAAUCCCCGGGCUUAACCUGGGAACUGCAUUGGUGACUGGCAGGCUUGAGUGUGGCAGAGGGAGGUAGAAUUCCACGUGUAGCAGUGAAAUGCGUAGAGAUGUGGAGGAAUACCGAUGGCGAAGGCAGCCUCCUGGGCCAACACUGACGCUCAUGCACGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCCUAAACGAUGUCAACUAGUUGUUGGGGAU-UCAUUUCCUUAGUAACGUAGCUAACGCGUGAAGUUGACCGCCUGGGGAGUACGGUCGCAAGAUUAAAACUCAAAGGAAUUGACGGGGACCCGCACAAGCGGUGGAUGAUGUGGAUUAAUUCGAUGCAACGCGAAAAACCUUACCUACCCUUGACAUGGUCGGAAUCCUGCUGAGAGGCGGGAGUGUCGAAAGAAACCGGCGCACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUGUCCUUAGUUGCUA-C--GCAA--A---GCACUCUAAGGAGACUGCCGGUGACAAACCGGAGGAAGGUGGGGAUGACGUCAAGUCCUCAUGGCCCUUAUGGGUAGGGCUUCACACGUCAUACAAUGGUCGGAACAGAGGGUUGCCAAGCCGCGAGGUGGAGCCAAUCCCAGAAAACCGAUCGUAGUCCGGAUCGCAGUCUGCAACUCGACUGCGUGAAGCUGGAAUCGCUAGUAAUCGCGGAUCAG-AUGCCGCGGUGAAUACGUUCCCGGGUCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUUCACCAGAAGUAGGUAGCCUAACCGCAAGGAGGGCGCUUACCACGGUGGGAUUCAUGACUGGGGUGAAGUCGUA" %) /*ali_16s*/ name :7600 "BurCalid" full_name "Burkholderia calidae" acc "FCOX02000168" tax_slv "Bacteria;Proteobacteria;Gammaproteobacteria;Betaproteobacteriales;Burkholderiaceae;Burkholderia-Caballeronia-Paraburkholderia;" start %i 137 stop %i 1665 version %i 1 tax_embl "Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia;" tax_embl_name "Burkholderia calidae" tax_greengenes "Unclassified;" tax_greengenes_name "Burkholderia calidae" tax_ltp "Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia" tax_ltp_name "Burkholderia calidae" tax_rdp "Unclassified;" tax_rdp_name "Burkholderia calidae" align_bp_score_slv %i 121 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 89.498642 align_quality_slv %i 97 aligned_slv "2018-03-21 15:36:43" ambig_slv %f 0 ann_src_slv "EMBL; RNAmmer;" collection_date "2013" date "2016-04-15; 2016-11-22;" description "Burkholderia calidae type strain LMG 29321 genome assembly, contig: contig000168" embl_class "Whole Genome Shotgun" embl_division "Prokaryotes" homop_slv %f 0.33 homop_events_slv %i 5 insdc %i 12490 isolate "LMG 29321" isolation_source "water" nuc_gene_slv %i 1528 nuc_region "137..1665" pintail_slv %i 100 seq_quality_slv %i 94 submit_author "Peeters C.; ; " submit_date "26-JAN-2016 LM-UGent, Laboratory of Microbiology, Ghent University, K. L. Ledeganckstraat 35, 9000 Gent, 9000, Belgium" tax_xref_embl "1777139" vector_slv %f 0 rel_ltp "s132" fullname_ltp "Burkholderia calidae" ARB_color %i 12 align_family_slv "FJ425909.1:0.9 AJ011506.1:0.87 AB201043.1:0.87 DQ413148.1:0.86 AJ420330.1:0.86 KX602193.1:0.85 AF208315.1:0.76 FR749910.1:0.76 FR733718.1:0.76 FR749942.1:0.76 X95918.1:0.76 GU993265.1:0.75 Y10754.1:0.75 Y10756.1:0.75 Y10755.1:0.75 X95921.1:0.75 Y10757.1:0.75 Y10762.1:0.75 Y10759.1:0.75 X95919.1:0.75 Y10758.1:0.75 X95920.1:0.75 Y10760.1:0.75 Y10763.1:0.75 AF192343.1:0.75 Y10766.1:0.75 Y10765.1:0.75 Y10764.1:0.75 LN846833.1:0.74 JQ955625.1:0.74 X95922.1:0.74 AE008922.4561295:0.73 X94198.1:0.73 X99469.1:0.73 X94201.1:0.73 X94199.1:0.73 AF399970.1:0.73 AF399969.1:0.72 FJ968722.1:0.72 X74698.1:0.71 " align_filter_slv "" align_log_slv "total inserted bases=1;longest insertion=1;total inserted bases before shifting=1;scoring: raw=-3920.35, weight=-4011.45, query-len=1529, aligned-bases=1529, score=0.977291; " align_startpos_slv %i 1002 align_stoppos_slv %i 43282 nuc %i 1529 turn_slv "none" hi_tax_ltp "Burkholderiaceae" url_lpsn_ltp "http://www.bacterio.net/burkholderia.html" phyl_ltp "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Betaproteobacteria/Burkholderiales/Burkholderiaceae" ARB_treetax "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Betaproteobacteria/Burkholderiales/Burkholderiaceae" %) /*species*/ species %% (% ali_16s %% (% data :7000 ".........AUUGAACGCUGGCGGCAUGCUUUACACAUGCAAGUCGAACGGCAGCGGGGAAGUGCUUGCACUUCUGCCGGCGAGUGGCGAACGGGUGAGUAAUAUAUCGGAACGUACCGAAUAGUGGGGGAUAACUGUCCGAAAGGAUGGCUAAUACCGCAUACGUCUUGAGAGAGAAAGUGGGGGCUCGCAAGGCCUCACGCUAUUUGAGCGGCCGAUAACUGAUUAGCUGGUUGGUGGGGUAAGAGCCCACCAAGGCGACGAUCAGUAGCGGGUCUGAGAGGAUGAUCCGCCACAUUGGGACUGAGACACGGCCCAAACUCCUACGGGAGGCAGCAGUGGGGAAUUUUGGACAAUGGGGGCAACCCUGAUCCAGCCAUGCCGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUUGUCGGGGAAGAAAAGGUUAGUGUUAAUACCACUGACUGAUGACGGUACCCGAAGAAUAAGCACCGGCUAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGGGCGCAGACGGUUACAUAAGUCAGGUGUGAAAUCCCCGAGCUCAACUUGGGAAUGGCGCUUGAAACUGUGUAGCUAGAGUGUGUCAGAGGGAGGUAGAAUUCCGCGUGUAGCAGUGAAAUGCGUAGAGAUGCGGAGGAAUACCGAUGGCGAAGGCAGCCUCCUGGGAUAACACUGACGUACAUGCCCGAAAGCGUGGGUAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCCUAAACGAUGACAAUUAGCUGUUGGUGUGCUUGCACAUU-AGUAGCGAAGCUAACGCGUGAAAUUGUCCGCCUGGGGAGUACGGUCGCAAAAUUAAAACUCAAAGGAAUUGACGGGGACCCGCACAAGCGGUGGAUGAUGUGGAUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUGUACGGAAUCUUUCAGAGACGGAAGAGUGCCUUCGGGAGCCGUAACACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUGUCAUUAGUUGCCAUCAU-UUG--UUGGGCACUCUAAUGAGACUGCCGGUGACAAACCGGAGGAAGGUGGGGAUGACGUCAAGUCCUCAUGGCCCUUAUGACCAGGGCUUCACACGUCAUACAAUGGUCGGUACAGAGGGUAGCCAAGCCGCGAGGCGGAGCCAAUCUCAGAAAGCCGAUCGUAGUCCGGAUUGCACUCUGCAACUCGAGUGCAUGAAGUCGGAAUCGCUAGUAAUCGCAGGUCAG-AUACUGCGGUGAAUACGUUCCCGGGUCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGGGAUACCAGAAUUGGGUAGGCUAACCGCAAGGAGGCCGCUUAACACGGUAUGCUUCAUGACUGGGGUGAAGUCGUA" %) /*ali_16s*/ name :7600 "StxAceti" full_name "Stenoxybacter acetivorans" acc "EF212897" tax_slv "Bacteria;Proteobacteria;Gammaproteobacteria;Betaproteobacteriales;Neisseriaceae;Stenoxybacter;" start %i 1 stop %i 1484 version %i 1 tax_embl "Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Stenoxybacter;" tax_embl_name "Stenoxybacter acetivorans" tax_greengenes "k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;" tax_greengenes_name "Stenoxybacter acetivorans" tax_ltp "Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Stenoxybacter" tax_ltp_name "Stenoxybacter acetivorans" tax_rdp "Bacteria;\"Proteobacteria\";Betaproteobacteria;Neisseriales;Neisseriaceae;Stenoxybacter;" tax_rdp_name "Stenoxybacter acetivorans" align_bp_score_slv %i 117 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 87.339195 align_quality_slv %i 93 aligned_slv "2018-03-21 15:34:03" ambig_slv %f 0 ann_src_slv "EMBL; RDP; RNAmmer;" author "Wertz J.T.; Breznak J.A.; ; " date "2007-02-06; 2007-11-01;" description "Stenoxybacter acetivorans strain TAM-DN1 16S ribosomal RNA gene, partial sequence." embl_class "Standard" embl_division "Prokaryotes" habitat_slv "termite gut" homop_slv %f 0.27 homop_events_slv %i 4 host "Termite" isolation_source "termite" journal "Appl. Environ. Microbiol. 73:6819-6828 (2007)" nuc_gene_slv %i 1484 nuc_region "1..1484" nuc_rp "1-1484" pintail_slv %i 100 publication_doi "10.1128/AEM.00786-07" pubmed_id "17827334" seq_quality_slv %i 95 strain "TAM-DN1 l[T] r[T] s[T]" submit_author "Wertz J.T.; Breznak J.A.; ; " submit_date "09-JAN-2007 Microbiology and Molecular Genetics, Michigan State University, 2209 Biomedical Physical Sciences, East Lansing, MI 48824, USA" tax_xref_embl "422441" title "Stenoxybacter acetivorans gen. nov., sp. nov., an acetate-oxidizing obligate microaerophile among diverse O2-consuming bacteria from termite guts" vector_slv %f 0 ARB_color %i 10 fullname_ltp "Stenoxybacter acetivorans" hi_tax_ltp "Neisseriaceae" phyl_ltp "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Betaproteobacteria/Neisseriales/Neisseriaceae" type_ltp "type sp." rel_ltp "s95" riskgroup_ltp "1" url_lpsn_ltp "http://www.bacterio.net/stenoxybacter.html" align_family_slv "AB201043.1:0.82 FJ425909.1:0.82 AJ011506.1:0.82 DQ413148.1:0.82 KX602193.1:0.8 AJ420330.1:0.79 JQ955625.1:0.74 GU993265.1:0.74 Y10759.1:0.74 AF208315.1:0.74 Y10756.1:0.74 X95921.1:0.74 FR749910.1:0.74 X95919.1:0.74 Y10762.1:0.74 Y10754.1:0.74 Y10755.1:0.74 FR749942.1:0.74 FR733718.1:0.74 Y10757.1:0.74 X95918.1:0.74 Y10758.1:0.74 X95920.1:0.73 Y10760.1:0.73 X95922.1:0.73 Y10766.1:0.73 Y10764.1:0.73 AE008922.4561295:0.73 Y10765.1:0.73 Y10763.1:0.72 AJ508775.1:0.72 AJ627597.1:0.71 AM182404.1:0.7 AF366377.1:0.7 AF366379.1:0.7 AF366384.1:0.7 AF366380.1:0.7 AF366381.1:0.7 AF366376.1:0.7 AF366375.1:0.7 " align_filter_slv "" align_log_slv "total inserted bases=2;longest insertion=1;total inserted bases before shifting=1;scoring: raw=-3746.3, weight=-4004.6, query-len=1484, aligned-bases=1484, score=0.935499; " align_startpos_slv %i 1043 align_stoppos_slv %i 43235 nuc %i 1484 turn_slv "none" ARB_treetax "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Betaproteobacteria/Neisseriales/Neisseriaceae" %) /*species*/ species %% (% ali_16s %% (% data :7000 ".........AGUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGCAGCACGUAAGAGCUUGCUCUUAUGGUGGCGAGUGGCGGACGGGUGAGGAAUACAUCGGAAUCUACUCUUUCGUGGGGGAUAACGUAGGGAAACUUACGCUAAUACCGCAUACGACCUACGGGUGAAAGCGGAGGACCUUCGGGCUUCGCGCGAUUGAAUGAGCCGAUGUCGGAUUAGCUAGUUGGCGGGGUAAAGGCCCACCAAGGCGACGAUCCGUAGCUGGUCUGAGAGGAUGAUCARCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGGACAAUGGGCGCAAGCCUGAUCCAGCCAUGCCGCGUGGGUGAAGAAGGCCUUCGGGUUGUAAAGCCCUUUUGUUGGGAAAGAAAAGCAGUCGGUUAAUACCCGAUUGUUCUGACGGUACCCAAAGAAUAAGCACCGGCUAACUUCGUGCCAGCAGCCGCGGUAAUACGAAGGGUGCAAGCGUUACUCGGAAUUACUGGGCGUAAAGCGUGCGUAGGUGGUGGUUUAAGUCUGUUGUGAAAGCCCUGGGCUCAACCUGGGAAUUGCAGUGGAUACUGGRUCACUAGAGUGUGGUAGAGGGUAGYGGAAUUCCCGGUGUAGCAGUGAAAUGCGUWGAGAUCGGGAGGAACAUCCGUGGCGAAGGCGGCUACCUGGACCAACACUGACACUGAGGCACGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCCUAAACGAUGCGAACUGGAUGUUGGGUGCAAUUUGCACGCAGUAUCGAAGCUAACGCGUUAAGUUCGCCGCCUGGGGAGUACGGUCGCAAGACUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGUAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAACUUUCCAGAGAUGGAUUGGUGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUGUCCUUAGUUGCCAGCACGUAAUGGUGGGAACUCUAAGGAGACCGCCGGUGACAAACCGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCUACACACGUACUACAAUGGUAGGGACAGAGGGCUGCAAACCCGCGAGGGUAAGCCAAUCCCAGAAACCCUAUCUCAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGCAGAUCAGAUUGCUGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUUUGUUGCACCAGAAGCAGGUAGCUUAACCUUCGGGAGGGCGCUUGCCACGGUGUGGCCGAUGACUGGGGUGAAGUCGUA" %) /*ali_16s*/ name :7600 "XanCucur" full_name "Xanthomonas cucurbitae" acc "Y10760" tax_slv "Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas;" start %i 1 stop %i 1502 version %i 1 tax_embl "Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas;" tax_embl_name "Xanthomonas cucurbitae" tax_greengenes "k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;" tax_greengenes_name "Xanthomonas cucurbitae" tax_ltp "Bacteria;Proteobacteria;Gammaproteobacteria;Lysobacteriales;Lysobacteraceae;Xanthomonas" tax_ltp_name "Xanthomonas cucurbitae" tax_rdp "Bacteria;\"Proteobacteria\";Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas;" tax_rdp_name "Xanthomonas cucurbitae" align_bp_score_slv %i 119 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 100 align_quality_slv %i 99 aligned_slv "2018-03-21 15:32:13" ambig_slv %f 0.27 ann_src_slv "EMBL; RDP; RNAmmer;" author "Hauben L.; Vauterin L.; Swings J.; Moore E.R.B.; ; " date "1997-04-01; 2013-04-12;" description "X.cucurbitae 16S rRNA gene" embl_class "Standard" embl_division "Prokaryotes" gene "16S rRNA" homop_slv %f 0.13 homop_events_slv %i 2 journal "Int. J. Syst. Bacteriol. 47:328-335 (1997)" nuc_gene_slv %i 1502 nuc_region "1..1502" nuc_rp "1-1502" pintail_slv %i 100 pubmed_id "9103617" seq_quality_slv %i 93 strain "LMG T l[T] r[T] s[T]" submit_author "Moore E.R.B.; ; " submit_date "24-JAN-1997 E.R.B. Moore, Gbf - Natl. Research Cntr. Biotechnology, Microbiology, Mascheroder Weg 1, Braunschweig, D-38124, FRG" tax_xref_embl "56453" title "Comparison of 16S ribosomal DNA sequences of all Xanthomonas species" vector_slv %f 0 ARB_color %i 12 fullname_ltp "Xanthomonas cucurbitae" hi_tax_ltp "Lysobacteraceae" phyl_ltp "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Lysobacteriales/Lysobacteraceae" rel_ltp "s93" riskgroup_ltp "1, p" url_lpsn_ltp "http://www.bacterio.net/xanthomonas.html" align_family_slv "AF208315.1:0.99 Y10758.1:0.99 FR733718.1:0.99 Y10755.1:0.99 FR749910.1:0.99 JQ955625.1:0.99 Y10757.1:0.99 Y10759.1:0.99 X95921.1:0.99 Y10762.1:0.99 FR749942.1:0.99 X95922.1:0.99 Y10763.1:0.98 Y10764.1:0.98 X95920.1:0.98 AE008922.4561295:0.98 Y10765.1:0.98 X95919.1:0.98 Y10766.1:0.96 GU993265.1:0.96 Y10756.1:0.96 Y10754.1:0.96 X95918.1:0.96 AF192343.1:0.92 AJ508775.1:0.79 AF366380.1:0.78 AJ627597.1:0.78 AF366378.1:0.78 AM182404.1:0.78 AF366383.1:0.78 AF366381.1:0.78 AF366375.1:0.78 AF366379.1:0.78 AF366377.1:0.78 AF366376.1:0.78 AF366384.1:0.78 FR729477.2849087:0.78 X99762.1:0.77 AF388386.1:0.77 LC004912.1:0.77 " align_filter_slv "" align_log_slv "scoring: raw=-4254.4, weight=-4258.19, query-len=1502, aligned-bases=1502, score=0.999108; " align_startpos_slv %i 1043 align_stoppos_slv %i 43260 nuc %i 1502 turn_slv "none" ARB_treetax "Bacteria/Alpha, Beta and Gammaproteobacteria/Gammaproteobacteria and Betaproteobacteria/Lysobacteriales/Lysobacteraceae" %) /*species*/ species %% (% ali_16s %% (% data :7000 "CUGGCUCAGAACGAACGCUGGCGGCAGGCUUAACACAUGCAAGUCGAACGCA----------UCGCAAGA---------UG-AGUGGCAGACGGGUGAGUAACGCGUGGGAACAUACCCUUUCCUGCGGAAUAGCUCCGGGAAACUGGAAUUAAUACCGCAUACGCCCUACGGGGGAAAGA--------UUUA------UCGGGGAAGGAUUGGCCCGCGUUGGAUUAGCUAGUUGGUGGGGUAAAGGCCUACCAAGGCGACGAUCCAUAGCUGGUCUGAGAGGAUGAUCAGCCACAUUGGGACUGAGACACGGCCCAAACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGGACAAUGGGCGCAAGCCUGAUCCAGCCAUGCCGCGUGAGUGAUGAAGGCCUUAGGGUUGUAAAGCUCUUUCACCGAUGAAGA------------UAA-------------UGACGGUAGUCGGAGAAGAAGCCCCGGCUAACUUCGUGCCAGCAGCCGCGGUAAUACGAAGGGGGCUAGCGUUGUUCGGAAUUACUGGGCGUAAAGCGCACGUAGGCGGAUAUUUAAGUCAGGGGUGAAAUCCCGCAGCUCAACUGCGGAACUGCCUUUGAUACUGGGUAUCUUGAGUAUGGAAGAGGUAAGUGGAAUUCCGAGUGUAGAGGUGAAAUUCGUAGAUAUUCGGAGGAACACCAGUGGCGAAGGCGGCUUACUGGUCCAUUACUGACGCUGAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGAAUGUUAGCCGUCGGGCAGUAUA-CUGUUCGGUGGCGCAGCUAACGCAUUAAACAUUCCGCCUGGGGAGUACGGUCGCAAGAUUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGCAGAACCUUACCAGCUCUUGACAUUCGGGGUAUGGGUUGGAGACGAUGUCCUUCAGUUAGGUGGCCCCAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUCGCCCUUAGUUGCCAGCAU-UUA--UUGGGCACUCUAAGGGGACUGCCGGUGAUAAGCCGGAGGAAGGUGGGGAUGACGUCAAGUCCUCAUGGCCCUUACGGGCUGGGCUACACACGUGCUACAAUGGUGGUGACAGUGGGCAGCGAGACAGCGAUGUCGAGCUAAUCUCC-AAAAGCCAUCUCAGUUCGGAUUGCACUCUGCAACUCGAGUGCAUGAAGUUGGAAUCGCUAGUAAUCGCAGAUCAG-AUGCUGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUUGGUUUUACCCGAAGGUAGUGCGCUAACCGCAAGGAGGCAGCUAACCACGGUAGGGUCAGCGACUGGGGUGAAGUCGUA" %) /*ali_16s*/ name :7600 "AgrSp148" full_name "Agrobacterium sp. YIC 5082" acc "MRDH01000011" tax_slv "Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium;" start %i 4946 stop %i 6437 version %i 1 tax_embl "Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Rhizobium/Agrobacterium group;Agrobacterium;" tax_embl_name "Agrobacterium sp. YIC 5082" tax_greengenes "Unclassified;" tax_greengenes_name "Agrobacterium sp. YIC 5082" tax_ltp "Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Agrobacterium" tax_ltp_name "Agrobacterium sp. YIC 5082" tax_rdp "Unclassified;" tax_rdp_name "Agrobacterium sp. YIC 5082" align_bp_score_slv %i 121 align_cutoff_head_slv %i 1 align_cutoff_tail_slv %i 1 align_ident_slv %f 89.759888 align_quality_slv %i 95 aligned_slv "2018-03-21 15:24:17" ambig_slv %f 0 ann_src_slv "EMBL; RNAmmer;" author "Yan J.; ; " collection_date "09-Sep-2015" country "China:Rudong, Jiangsu" date "2017-03-16; 2017-03-16;" description "Agrobacterium sp. YIC 5082 C175, whole genome shotgun sequence." embl_class "Whole Genome Shotgun" embl_division "Prokaryotes" homop_slv %f 0.2 homop_events_slv %i 3 host "Sesbania cannabina" insdc %i 355330 journal "Unpublished" nuc_gene_slv %i 1484 nuc_region "4946..6437" nuc_rp "1-6821" seq_quality_slv %i 96 strain "YIC 5082" submit_author "Yan J.; ; " submit_date "01-DEC-2016 Soil material cycle, Northeast institute of Geography and Agroecology, Chinese Academy of Sciences, Haping road 138#, Harbin, Heilongjiang 150081, China" tax_xref_embl "1923828" title "Agrobacterium salinitoleratium sp. nov., a saline-alkaline-tolerant bacterium isolated from root nodule of Sesbania Cannabina" vector_slv %f 0 rel_ltp "s132" fullname_ltp "Agrobacterium salinitolerans" ARB_color %i 12 align_family_slv "X94198.1:0.87 X99469.1:0.86 X94199.1:0.85 X94201.1:0.84 AF399969.1:0.84 AF399970.1:0.83 KX870191.1:0.78 AJ877265.1:0.76 X95918.1:0.76 AF208315.1:0.75 Y10760.1:0.75 Y10755.1:0.75 GU993265.1:0.75 Y10757.1:0.75 Y10756.1:0.75 X95921.1:0.75 Y10765.1:0.75 FR749942.1:0.75 Y10766.1:0.75 Y10758.1:0.75 Y10764.1:0.75 Y10762.1:0.75 X95919.1:0.75 AF192343.1:0.75 FR733718.1:0.75 Y10754.1:0.75 X95920.1:0.75 Y10759.1:0.75 JQ955625.1:0.75 Y10763.1:0.75 AE008922.4561295:0.75 X95922.1:0.74 FR749910.1:0.74 AJ011506.1:0.74 AB201043.1:0.73 DQ413148.1:0.72 GU929924.1:0.71 AY257972.1:0.71 EF599164.1:0.71 HE978310.1:0.71 " align_filter_slv "" align_log_slv "shifting bases to fit in 2 bases at pos 32490 to 32490;total inserted bases=4;longest insertion=3;total inserted bases before shifting=1;scoring: raw=-3716.9, weight=-3891.59, query-len=1492, aligned-bases=1490, score=0.95511; " align_startpos_slv %i 998 align_stoppos_slv %i 43288 nuc %i 1492 turn_slv "none" hi_tax_ltp "Rhizobiaceae" url_lpsn_ltp "http://www.bacterio.net/agrobacterium.html" phyl_ltp "Bacteria/Alpha, Beta and Gammaproteobacteria/Alphaproteobacteria/Rhizobiales/Rhizobiaceae and Aurantimonadaceae" ARB_treetax "Bacteria/Alpha, Beta and Gammaproteobacteria/Alphaproteobacteria/Rhizobiales/Rhizobiaceae and Aurantimonadaceae" %) /*species*/ species %% (% ali_16s %% (% data :7000 "CUGGCUCAGAACGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAGCGAA---------GCCUUCGGGC--------UU-AGCGGCGGACGGGUGAGUAACGCGUGGGAAUGUACCCUUCUCUGCGGAAUAGCCACUGGAAACGGUGAGUAAUACCGCAUACGCCCUUCGGGGGAAAGA--------UUUA------UCGGAGAAGGAUCAGCCCGCGUCUGAUUAGAUAGUUGGUGGGGUAACGGCCUACCAAGUCGACGAUCAGUAGCUGGUUUUAGAGGAUGAUCAGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUCUUAGACAAUGGGCGCAAGCCUGAUCUAGCCAUGCCGCGUGAGUGAUGAAGGCCCUAGGGUCGUAAAGCUCUUUCGCCAGGGAUGA------------UAA-------------UGACAGUACCUGGUAAAGAAACCCCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGGGUUAGCGUUGUUCGGAAUUACUGGGCGUAAAGCGCACGUAGGCGGACUAUUAAGUCAGGGGUGAAAUCCCGGGGCUCAACCCCGGAACUGCCCUUGAUACUGGUAGUCUUGAGUUCGAGAGAGGUGAGUGGAAUUCCGAGUGUAGAGGUGAAAUUCGUAGAUAUUCGGAGGAACACCAGUGGCGAAGGCGGCUCACUGGCUCGAUACUGACGCUGAGGUGCGAAAGUGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACACCGUAAACGAUGAAUGCCAGUCGUCGGGUUGCAUG-CAAUUCGGUGACACACCUAACGGAUUAAGCAUUCCGCCUGGGGAGUACGGUCGCAAGAUUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGCAGAACCUUACCAACCCUUGACAUCCUGUG-CUACUGGAGAGAUCCAUGGUUCCCUUCGGGGACGCAGUGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUCGGUUAAGUCCGGCAACGAGCGCAACCCACACCCUUAGUUGCCAGCAG-UUC--CUGGGCACUCUAGGGGAACUGCCCGUGAUAAGCGGGAGGAAGGUGUGGAUGACGUCAAGUCCUCAUGGCCCUUACGGGUUGGGCUACACACGUGCUACAAUGGCAGUGACAAUGGGU----------------------AAUCCCC-AAAAACUGUCUCAGUUCGGAUUGUCGUCUGCAACUCGACGGCAUGAAGUCGGAAUCGCUAGUAAUCGCGUAACAG-AUGACGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACAUCAUGGGAGUUGGGUUUACCCGAAGACGGUGCGCCAACCUUCGGGGGGCAGCUGGCCACGGUAGGCUCAGCGACUGGGAUGAAGUCGUA" %) /*ali_16s*/ name :7600 "PslBats2" full_name "Pseudooceanicola batsensis HTCC2597" acc "AAMO01000005" tax_slv "Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Pseudooceanicola;" start %i 167902 stop %i 169347 version %i 1 tax_embl "Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Pseudooceanicola;" tax_embl_name "Pseudooceanicola batsensis HTCC2597" tax_greengenes "k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;" tax_greengenes_name "Pseudooceanicola batsensis HTCC2597" tax_ltp "Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Pseudooceanicola" tax_ltp_name "Pseudooceanicola batsensis" tax_rdp "Unclassified;" tax_rdp_name "Pseudooceanicola batsensis HTCC2597" align_bp_score_slv %i 121 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 92.114960 align_quality_slv %i 96 aligned_slv "2018-03-21 15:20:12" ambig_slv %f 0 ann_src_slv "RNAmmer;" author "Thrash J.C.; Cho J.C.; Vergin K.L.; Giovannoni S.J.; ; " date "2006-01-06; 2016-04-11;" description "Pseudooceanicola batsensis HTCC2597 1099451005753, whole genome shotgun sequence." embl_class "Whole Genome Shotgun" embl_division "Prokaryotes" habitat_slv "marine habitat" homop_slv %f 0.35 homop_events_slv %i 5 insdc %i 13449 journal "J. Bacteriol. 192:3549-3550 (2010)" nuc_gene_slv %i 1446 nuc_region "167902..169347" nuc_rp "1-353299" pintail_slv %i 100 publication_doi "10.1128/JB.00412-10" pubmed_id "20418400" seq_quality_slv %i 94 strain "HTCC2597 l[T] s[T]" submit_author "Giovannoni S.J.; Cho J.-C.; Ferriera S.; Johnson J.; Kravitz S.; Halpern A.; Remington K.; Beeson K.; Tran B.; Rogers Y.-H.; Friedman R.; Venter J.C.; ; " submit_date "23-DEC-2005 J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA" tax_xref_embl "252305" title "Genome sequences of Oceanicola granulosus HTCC2516(T) and Oceanicola batsensis HTCC2597(TDelta)" vector_slv %f 0 ARB_color %i 12 fullname_ltp "Pseudooceanicola batsensis" hi_tax_ltp "Rhodobacteraceae" phyl_ltp "Bacteria/Alpha, Beta and Gammaproteobacteria/Alphaproteobacteria/Rhodobacterales" rel_ltp "s128" riskgroup_ltp "1" url_lpsn_ltp "http://www.bacterio.net/pseudooceanicola.html" align_family_slv "AJ877265.1:0.9 KX870191.1:0.88 X94198.1:0.78 X99469.1:0.77 X94199.1:0.77 AF399970.1:0.77 X94201.1:0.77 AF399969.1:0.76 FJ968722.1:0.73 AB013297.1:0.72 X74698.1:0.72 DQ097523.1:0.71 LN846833.1:0.71 EF599164.1:0.71 EU541605.1:0.7 EF599162.1:0.7 " align_filter_slv "" align_log_slv "total inserted bases=2;longest insertion=1;total inserted bases before shifting=1;scoring: raw=-3650.94, weight=-3786, query-len=1446, aligned-bases=1446, score=0.964326; " align_startpos_slv %i 1006 align_stoppos_slv %i 43264 nuc %i 1446 turn_slv "none" ARB_treetax "Bacteria/Alpha, Beta and Gammaproteobacteria/Alphaproteobacteria/Rhodobacterales" %) /*species*/ species %% (% ali_16s %% (% data :7000 "................GCUGGCGGCGCGUCUUAAGCAUGCAAGUCGAGCGGC-----AAGGGCAGCGAUGCCCCU----AG-AGCGGCGGACUGGUGAGUAACGCGUGGGGACCUACCCUUAGGAUGGGGAUAGCCAUUAGAAAUAGUGGGUAAUACCGAAUAUGUCGUGUGGUUGCAAAGAAAGGAGCU-AAGGCU-C-CGCCUGAGGAUGGGCCCGCGUCCCAUUAGGUAGUUGGUGCGGUAAAGGCGUACCAAGCCGGAGAUGGGUAGCCGGCCUGAGAGGGUGAACGGCCACACUGGGACUGAGAUACGGCCCAGACUCCUACGGGAGGCAGCAGCUAAGAAUAUUCCGCAAUGGGCGAAAGCCUGACGGAGCGACGCCGCGUGUACGAAGAAGGCCGAAAGGUUGUAAAGUACUUUUUUUGCGGAAGAAAAGCGGUGGGGGAAUGCC--AUCGUGAUGACGAGAAGCGAAGAAUAAGCCCCGGCUAAUUACGUGCCAGCAGCCGCGGUAACACGUAAGGGGCGAGCGUUGUUCGGAAUUAUUGGGCGUAAAGGGCGCGUAGGCGGUUAUGGAAGUCUGAUGUGAAAGGCAGGAGCUUAACUUCUGGAUUGCAUUGGAAACUGGAUGACUAGAGUCAUGGAGGGGGAGUUGGAAUUCCUAGUGUAGGGGUGAAAU-UGUAGAUAUUAGGAAGAACACCGGUGGCGAAGGCGAACUUCUAG-CCAAUACUGACGCUGAGGCGCGAAAGUGCGGGGAGCGAACAGGAUUAGAUACCCUGGUAGUCCGCACUAUAAACGAUGUGCACUAGGUGUUGGGCCGA--G-CGGUUCAGUGCCGGAGCGAACGUGAUAAGUGCACCGCCUGGGGAGUAUGCCCGCAAGGGUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGAUACGCGAGGAACCUUACCUGGGUUUGACAUGGAGGGAAGGGUGCAGAGAUGUACCCGCCUGGCAACAGGCGCUUUCACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUACUGCCAGUUGCUAACAGGUAAAGCUGAGGACUCUGGCGGAACUGCCGGUGACAAACCGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUAUGUCCAGGGCUACACACGUGCUACAAUGGUUGGUACAACGUGACGCGAAACCGCGAGGUAAAGCGAAGCACG-AAAAGCCAGCCUAGUUCGGAUUGAAGUCUGAAACCCGACUUCAUGAAGUUGGAAUCGCUAGUAAUCGCACAUCAG-AUGGUGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUCCGAGUUGGAGGUACCCGAAGCCGGUAGUCUAACCGCAAGG-GGACGCUGUCGAAGGUACGUUUAGUGAGGAGGGUGAAGUCGUA" %) /*ali_16s*/ name :7600 "TreIsopt" full_name "Treponema isoptericolens" acc "AM182455" tax_slv "Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Spirochaetaceae;Treponema;" start %i 1 stop %i 1464 version %i 1 tax_embl "Bacteria;Spirochaetes;Spirochaetales;Spirochaetaceae;Treponema;" tax_embl_name "Treponema isoptericolens" tax_greengenes "k__Bacteria;p__Spirochaetes;c__Spirochaetes;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;" tax_greengenes_name "Treponema isoptericolens" tax_ltp "Bacteria;Spirochaetes;Spirochaetes;Spirochaetales;Spirochaetaceae;Treponema" tax_ltp_name "Treponema isoptericolens" tax_rdp "Bacteria;\"Spirochaetes\";Spirochaetia;Spirochaetales;Spirochaetaceae;Treponema;" tax_rdp_name "Treponema isoptericolens" align_bp_score_slv %i 113 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 74.731186 align_quality_slv %i 72 aligned_slv "2018-03-21 15:12:03" ambig_slv %f 0 ann_src_slv "EMBL; RDP; RNAmmer;" author "Droge S.; Rachel R.; Radek R.; Konig H.; ; " country "Germany" date "2006-01-19; 2012-09-05;" description "Treponema isoptericolens partial 16S rRNA gene, type strain SPIT5T" embl_class "Standard" embl_division "Prokaryotes" gene "16S rRNA" habitat_slv "hindgut of host" homop_slv %f 0.41 homop_events_slv %i 4 host "Termite" isolation_source "Incisitermes tabogae" journal "Int. J. Syst. Evol. Microbiol. 58:1079-1083 (2008)" nuc_gene_slv %i 1464 nuc_region "1..1464" nuc_rp "1-1464" pintail_slv %i 100 publication_doi "10.1099/ijs.0.64699-0" pubmed_id "18450692" seq_quality_slv %i 93 strain "type strain: SPIT5 l[T] r[T] s[T]" submit_author "Droege S.; ; " submit_date "18-JAN-2006 Droege S., Institute of Microbiology and Wine Res., University Mainz, Becherweg 15,, 55128 Mainz, GERMANY." tax_xref_embl "367456" title "Treponema isoptericolens sp. nov., a novel spirochaete from the hindgut of the termite Incisitermes tabogae" vector_slv %f 0 ARB_color %i 12 fullname_ltp "Treponema isoptericolens" hi_tax_ltp "Spirochaetaceae" phyl_ltp "Bacteria/Spirochaetes/Spirochaetaceae" rel_ltp "s95" riskgroup_ltp "1" url_lpsn_ltp "http://www.bacterio.net/treponema.html" align_family_slv "AF399969.1:0.68 X99469.1:0.68 X94201.1:0.68 X94199.1:0.68 X94198.1:0.68 Y10755.1:0.68 GU993265.1:0.68 X95918.1:0.68 Y10757.1:0.68 Y10756.1:0.68 Y10754.1:0.68 Y10762.1:0.68 Y10759.1:0.68 X95920.1:0.68 FR733718.1:0.68 AF208315.1:0.68 " align_filter_slv "" align_log_slv "shifting bases to fit in 3 bases at pos 3655 to 3656;shifting bases to fit in 4 bases at pos 3657 to 3659;shifting bases to fit in 1 bases at pos 40928 to 40928;total inserted bases=19;longest insertion=5;total inserted bases before shifting=1;scoring: raw=-2944.56, weight=-4043.12, query-len=1464, aligned-bases=1464, score=0.728289; " align_startpos_slv %i 1059 align_stoppos_slv %i 43219 nuc %i 1464 turn_slv "none" ARB_treetax "Bacteria/Spirochaetes/Spirochaetaceae" %) /*species*/ species %% (% ali_16s %% (% data :7000 "CUGGCUCAGGAUGAACGCUGACAGAAUGCUUAACACAUGCAAGUCGACUGGA--AUU---CACCUUCGGGUG---AUAGUACGGUGGCGGACGGGUGAGUAACGCGUAAAGACUUGCCCUCUAGACUGGGACAACUGUUGGAAACGACAGCUAAUACCGGAUA--GCGGCAUCGCGAAAGC--------UAUA------UCGCUAGAGGAGAGCUUUGCGUCCCAUUAGUUAGUUGGUAGGGUAAUGGCCUACCAAGACGAUGAUGGGUAGCCGGCCUGAGAGGGUGAUCGGCCACAAGGGGACUGAGACACGGCCCUUACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGGACAAUGGACUAAAGUCUGAUCCAGCAAUUCUGUGUGCACGAUGAAGGUCUUCGGAUCGUAAAGUGCUUUCAGGUGGGAAGAA-----------GAAA---------G--UGACGGUACCACCAGAAGAAGCGACGGCUAAAUACGUGCCAGCAGCCGCGGUAAUACGUAUGUCGCAAGCGUUAUCCGGAAUUAUUGGGCGUAAAGCGCGUCUAGGCGGCCUUUUAAGUCUGAUGUGAAAAUGCGGGGCUCAACUCC-GUAUUGCGUUGGAAACUGGAAGGCUAGAGUAUCAGAGAGGUGGGCGGAACUACAAGUGUAGAGGUGAAAUUCGUAGAUAUUUGUAGGAAUGCCGAUGGGGAAGCCAGCUCACUGGAUGAAUACUGACGCUAAAGCGCGAAAGCGUGGGGAGCAAACGGGAUUAGAUACCCCGGUAGUCCACGCCGUAAACGAUGAUCACUAAGUGUGGGGGGUCGAA-CC--UCCGUGCUCAAGCUAACGCGAUAAGUGAUCCGCCUGGGGAGUACGUACGCAAGUAUGAAACUCAAAGGAAUUGACGGGGACCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGACGCAACGCGAGGAACCUUACCAGCCCUUGACAUCCCAAGAACUAGGCAGAGAUGCUUAGGUGCUUUCGGGAACUUGGUGACAGGUGGUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCUAUCGUAUGUUACCAUCAU-UAA--UUGGGGACUCAUGCGAGACUGCCUGCGACGAGCAGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGCCCCUUAUGGGCUGGGCUACACACGUGCUACAAUGGACAAUACAGAGGGUAGCGAUCCCGCGAGGGGGAGCCAAUCUCAGAAAGUUGUUCUUAGUUCGGAUCGCAGUCUGCAACUCGACUGCGUGAAGUUGGAAUCGCUAGUAAUCGCGAAUCAGAAUGUCGCGGUGAAUACGUUCUCGGGUCUUGUACACACCGCCCGUCACACCACGAGAGUUGGUUGCACCUGAAGUAGCAGGCCUAACCUUUAGGAGGGAUGUUCCUAAGGUGUGAUUAGCGAUUGGGGUGAAGUCGUA" %) /*ali_16s*/ name :7600 "IlyPoly2" full_name "Ilyobacter polytropus DSM 2926" acc "CP002281" tax_slv "Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Ilyobacter;" start %i 190221 stop %i 191730 version %i 1 tax_embl "Bacteria;Fusobacteria;Fusobacteriales;Fusobacteriaceae;Ilyobacter;" tax_embl_name "Ilyobacter polytropus DSM 2926" tax_greengenes "k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Propionigenium;" tax_greengenes_name "Ilyobacter polytropus DSM 2926" tax_ltp "Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Ilyobacter" tax_ltp_name "Ilyobacter polytropus" tax_rdp "Bacteria;\"Fusobacteria\";Fusobacteriia;\"Fusobacteriales\";\"Fusobacteriaceae\";Ilyobacter;" tax_rdp_name "Ilyobacter polytropus" align_bp_score_slv %i 117 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 76.5748 align_quality_slv %i 87 aligned_slv "2018-03-21 15:11:05" ambig_slv %f 0 ann_src_slv "EMBL; RDP; RNAmmer;" author "Sikorski J.; Chertkov O.; Lapidus A.; Nolan M.; Lucas S.; Del Rio T.G.; Tice H.; Cheng J.F.; Tapia R.; Han C.; Goodwin L.; Pitluck S.; Liolios K.; Ivanova N.; Mavromatis K.; Mikhailova N.; Pati A.; Chen A.; Palaniappan K.; Land M.; Hauser L.; Chang Y.J.; Jeffries C.D.; Brambilla E.; Yasawong M.; Rohde M.; Pukall R.; Spring S.; Goker M.; Woyke T.; Bristow J.; Eisen J.A.; Markowitz V.; Hugenholtz P.; Kyrpides N.C.; Klenk H.P.; ; " country "Germany" date "2010-10-28; 2015-06-09;" description "Ilyobacter polytropus DSM 2926, complete genome." embl_class "Standard" embl_division "Prokaryotes" habitat_slv "sediment" homop_slv %f 0.2 homop_events_slv %i 2 insdc %i 32577 isolation_source "marine mud" journal "Stand Genomic Sci 3:304-314 (2010)" nuc_gene_slv %i 1510 nuc_region "190221..191730" nuc_rp "1-2046464" pintail_slv %i 100 pubmed_id "21304735" seq_quality_slv %i 96 strain "DSM 2926 e[G] l[T] r[T] s[T]" submit_author "Lucas S.; Copeland A.; Lapidus A.; Glavina del Rio T.; Dalin E.; Tice H.; Bruce D.; Goodwin L.; Pitluck S.; Kyrpides N.; Mavromatis K.; Ivanova N.; Ovchinnikova G.; Chertkov O.; Detter J.C.; Han C.; Tapia R.; Land M.; Hauser L.; Markowitz V.; Cheng J.-F.; Hugenholtz P.; Woyke T.; Wu D.; Spring S.; Pukall R.; Steenblock K.; Brambilla E.; Klenk H.-P.; Eisen J.A.; ; " submit_date "18-OCT-2010 US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA" tax_xref_embl "572544" title "Complete genome sequence of Ilyobacter polytropus type strain (CuHbu1)" vector_slv %f 0 ARB_color %i 10 fullname_ltp "Ilyobacter polytropus" hi_tax_ltp "Fusobacteriaceae" phyl_ltp "Bacteria/Fusobacteria/Fusobacteriaceae" type_ltp "type sp." rel_ltp "s111" riskgroup_ltp "1" url_lpsn_ltp "http://www.bacterio.net/ilyobacter.html" align_family_slv "AF399969.1:0.65 X94201.1:0.65 X94199.1:0.65 X99469.1:0.65 X94198.1:0.65 AF399970.1:0.64 KX602193.1:0.64 FJ425909.1:0.63 AJ420330.1:0.63 DQ413148.1:0.62 AJ011506.1:0.62 AB201043.1:0.62 KU719509.1:0.62 KT633950.1:0.61 AF208315.1:0.59 JQ955625.1:0.59 " align_filter_slv "" align_log_slv "total inserted bases=5;longest insertion=1;total inserted bases before shifting=1;scoring: raw=-3363.38, weight=-3833.62, query-len=1510, aligned-bases=1510, score=0.877335; " align_startpos_slv %i 1006 align_stoppos_slv %i 43277 nuc %i 1510 turn_slv "none" ARB_treetax "Bacteria/Fusobacteria/Fusobacteriaceae" %) /*species*/ species %% (% ali_16s %% (% data :7000 ".............................................................................GGCG-ACCGGCGCACGGGUGCGUAACACGUAUGCACCUACCUUAAACUGGGAGAUAGCCCGGGGAAACUCGGAUUAAUACCCCAUAACACAUCAUGACUAAAGA--------UUUA------UCGGUUUAAGAUGGGCAUGCGUUCGAUUAGCUAGUUGGUGAGGUAAUGGCUCACCAAGGCUACGAUCGAUAGGGGGUCUGAGAGGAUGAUCCCCCACACUGGUACUGAGAUACGGACCAGACUCCUACGGGAGGCAGCAGUAGGGAAUAUUGGUCAAUGGAGGCAACUCUGAACCAGCCAUGCCGCGUGUAGGAAGAAGGCGUCUGCGUUGUAAACUACUUUUGAUUGGGAACAAAUGACUCU---UGCG----AGAGUAGCUGAGUGUACCAAUAGAAUAAGCCACGGCUAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGUGGCAAGCGUUGUCCGGAUUUAUUGGGUUUAAAGGGUGCGUAGGCGGCUUAAUAAGUCAGUGGUGAAAGCCGAUCGCUUAACGAUCGAACUGCCAUUGAUACUGCUAGGCUUGAGUAUAGAUGAGGUAGGCGGAAUUGCAG-UGUAGCGGUGAAAUGCAUAGAUAUUGUCAAGAACACCAAUUGCGAAGGCAGCUUACUAAGUUAUAACUGACGCUGAGGCACGAAAGUGCGGGGAUCAAACAGGAUUAGAUACCCUGGUAGUCCGCACCGUAAACGAUGAUCACUCGCUGUGUGCG--AUAAA--AGUACGCGGCCAAGCGAAAGCGAUAAGUGAUCCACCUGGGGAGUACGCCCGCAAGGGUGAAACUCAAAGGAAUUGACGGGGGUCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGAUACGCGAGGAACCUUACCUAGGCUAGAAUGUGAAGGAAUGUAUCAGAAAUGGUGCAG--UCAGCAAGACCUGAAA-CAAGGUGCUGCAUGGCUGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCUAUCUUUAGUUGCCAGCGAGUUAUGUCGGGGACUCUAGAGAGACUGCCUGUG-UAAACAGGAGGAAGGAGGGGACGACGUCAAGUCAUCAUGGCCCUUACGCCUAGGGCUACACACGUGCUACAAUGGCGCAUACAGAGUGUUGCAAGCUAGUGAUAGCAAGCCAAUCACAAAAAGUGCGUCUCAGUUCGGAUUGAAGUCUGCAACUCGACUUCAUGAAGCUGGAAUCGCUAGUAAUCGCGUAUCAGAAUGACGCGGUGAAUACGUUCCCGGACCUUGUACACACCGCCCGUCAAGCCAUGAAAGUCUGGUGGACCUGAAGGCCGUAACC-----GCAA----GGAGCGGCUCAGGGUAAAACAGGUAAUUAGGGCUAA......" %) /*ali_16s*/ name :7600 "CytHutc2" full_name "Cytophaga hutchinsonii ATCC 33406" acc "CP000383" tax_slv "Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;Cytophagaceae;Cytophaga;" start %i 1997115 stop %i 1998496 version %i 1 tax_embl "Bacteria;Bacteroidetes;Cytophagia;Cytophagales;Cytophagaceae;Cytophaga;" tax_embl_name "Cytophaga hutchinsonii ATCC 33406" tax_greengenes "k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Cytophaga;" tax_greengenes_name "Cytophaga hutchinsonii ATCC 33406" tax_ltp "Bacteria;Bacteroidetes;Cytophagia;Cytophagales;Cytophagaceae;Cytophaga" tax_ltp_name "Cytophaga hutchinsonii" tax_rdp "Bacteria;\"Bacteroidetes\";Cytophagia;Cytophagales;Cytophagaceae;Cytophaga;" tax_rdp_name "Cytophaga hutchinsonii" align_bp_score_slv %i 101 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 82.919708 align_quality_slv %i 88 aligned_slv "2018-03-21 14:55:41" ambig_slv %f 0 ann_src_slv "EMBL; RNAmmer;" author "Xie G.; Bruce D.C.; Challacombe J.F.; Chertkov O.; Detter J.C.; Gilna P.; Han C.S.; Lucas S.; Misra M.; Myers G.L.; Richardson P.; Tapia R.; Thayer N.; Thompson L.S.; Brettin T.S.; Henrissat B.; Wilson D.B.; McBride M.J.; ; " culture_collection "ATCC:33406" date "2006-07-12; 2014-05-15;" description "Cytophaga hutchinsonii ATCC 33406, complete genome." embl_class "Standard" embl_division "Prokaryotes" habitat_slv "soil" homop_slv %f 0.29 homop_events_slv %i 4 insdc %i 54 journal "Appl. Environ. Microbiol. 73:3536-3546 (2007)" nuc_gene_slv %i 1382 nuc_region "1997115..1998496" nuc_rp "1-4433218" pintail_slv %i 100 publication_doi "10.1128/AEM.00225-07" pubmed_id "17400776" seq_quality_slv %i 95 strain "ATCC 33406 e[G] l[T] r[T] s[T]" submit_author "Copeland A.; Lucas S.; Lapidus A.; Barry K.; Detter J.C.; Glavina del Rio T.; Hammon N.; Israni S.; Dalin E.; Tice H.; Pitluck S.; Brettin T.; Bruce D.; Challacombe J.F.; Chertkov O.; Han S.; Tapia R.; McBride M.J.; Misra M.; Myers G.L.; Thayer N.N.; Thompson L.S.; Xie G.; Gilna P.; Schmutz J.; Larimer F.; Land M.; Hauser L.; Kyrpides N.; Lykidis A.; Ivanova N.; Mavrommatis K.; Rubin E.; Richardson P.; ; " submit_date "02-JUN-2006 US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA" tax_xref_embl "269798" title "Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii" vector_slv %f 0 ARB_color %i 10 fullname_ltp "Cytophaga hutchinsonii" hi_tax_ltp "Cytophagaceae" phyl_ltp "Bacteria/Bacteroidetes/Cytophagales/Cytophagaceae" type_ltp "type sp." rel_ltp "s93" riskgroup_ltp "1" url_lpsn_ltp "http://www.bacterio.net/cytophaga.html" align_family_slv "KP261822.1:0.77 GU929924.1:0.65 AM162656.1:0.65 KM099166.1:0.64 DQ922920.1:0.64 AY426979.1:0.64 AJ316171.1:0.64 GU078672.1:0.64 GU929925.1:0.64 KC751062.1:0.64 DQ097523.1:0.64 AM162657.1:0.64 AY682382.1:0.64 Y13830.1:0.64 AY155585.1:0.64 Y08430.1:0.64 " align_filter_slv "" align_log_slv "total inserted bases=1;longest insertion=1;total inserted bases before shifting=1;scoring: raw=-3112.31, weight=-3531.75, query-len=1382, aligned-bases=1382, score=0.881238; " align_startpos_slv %i 1768 align_stoppos_slv %i 43160 nuc %i 1382 turn_slv "none" ARB_treetax "Bacteria/Bacteroidetes/Cytophagales/Cytophagaceae" %) /*species*/ species %% (% ali_16s %% (% data :7000 "CUGGCUCAGGACGAACGCUGGCGGCGUGCUUAACACAUGCAAGUCGAACGUG--AUG-UCAGAGCUUGCUCUGG--CGGAUCAGUGGCGAACGGGUGAGUAACACGUGAGUACCUGCCCCCGACUCUGGGAUAACUGCUAGAAAUGGUAGCUAAUACCGGAUA--GCCGCAUGGUGAAAGA--------AUU-------UCGGUUGGGGAUGGACUCGCGGCCUAUCAGGUUGUUGGUGAGGUAAUGGCUCACCAAGCCUACGACGGGUAGCCGGCCUGAGAGGGUGACCGGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGAAAGCCUGAUGCAGCAACGCCGCGUGAGGGAUGACGGCCUUCGGGUUGUAAACCUCUUUUAGUAGGGAAGAAG-C--------GAAA---------G--UGACGGUACCUGCAGAAAAAGCACCGGCUAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGGUGCAAGCGUUGUCCGGAAUUAUUGGGCGUAAAGAGCUCGUAGGCGGUUUGUCGCGUCUGCUGUGAAAUCCCGAGGCUCAACCUCGGGUCUGCAGUGGGUACGGGCAGACUAGAGUGCGGUAGGGGAGAUUGGAAUUCCUGGUGUAGCGGUGGAAUGCGCAGAUAUCAGGAGGAACACCGAUGGCGAAGGCAGAUCUCUGGGCCGUAACUGACGCUGAGGAGCGAAAGCAUGGGGAGCGAACAGGAUUAGAUACCCUGGUAGUCCAUGCCGUAAACGUUGGGAACUAGAUGUGGGGACCUUCCAGGUCUCCGUGUCGCAGCUAACGCAUUAAGUUCCCCGCCUGGGGAGUACGGCCGCAAGGCUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGCGGAGCAUGCGGAUUAAUUCGAUGCAACGCGAAGAACCUUACCAAGGCUUGACAUAACCGGAAACGUGCAGAGAUGUGCGCC--CCGCAAGG--UCGGUAUACAGGUGGUGCAUGGUUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUCGUUCUAUGUUGCCAGCACGUAAUGGUGGGAACUCAUAGGAGACUGCCGGGGCCAACCCGGAGGAAGGUGGGGAUGACGUCAAAUCAUCAUGCCCCUUAUGUCUUGGGCUUCACGCAUGCUACAAUGGCCGGUACAAAGGGCUGCGAUACCGUAAGGUGGAGCGAAUCCCAAAAAGCCGGUCUCAGUUCGGAUUGAGGUCUGCAACUCGACCUCAUGAAGUCGGAGUCGCUAGUAAUCGCAGAUCAGAACGCUGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCAAGUCAUGAAAGUCGGUAACACCCGAAGCCAGUGGCCUAACCGCAAGGGAGGAGCUGUCGAAGGUGGGAUCGGUGAUUAGGACUAAGUCGUA" %) /*ali_16s*/ name :7600 "ClaMich8" full_name "Clavibacter michiganensis subsp. sepedonicus" acc "AM849034" tax_slv "Bacteria;Actinobacteria;Actinobacteria;Micrococcales;Microbacteriaceae;Clavibacter;" start %i 1297189 stop %i 1298706 version %i 1 tax_embl "Bacteria;Actinobacteria;Micrococcales;Microbacteriaceae;Clavibacter;" tax_embl_name "Clavibacter michiganensis subsp. sepedonicus" tax_greengenes "k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Clavibacter;s__michiganensis;" tax_greengenes_name "Clavibacter michiganensis subsp. sepedonicus" tax_ltp "Bacteria;Actinobacteria;Actinobacteria;Micrococcales;Microbacteriaceae;Clavibacter" tax_ltp_name "Clavibacter michiganensis subsp. sepedonicus" tax_rdp "Bacteria;\"Actinobacteria\";Actinobacteria;Actinobacteridae;Actinomycetales;Micrococcineae;Microbacteriaceae;Clavibacter;" tax_rdp_name "Clavibacter michiganensis subsp. michiganensis" align_bp_score_slv %i 122 align_cutoff_head_slv %i 1 align_cutoff_tail_slv %i 0 align_ident_slv %f 95.121948 align_quality_slv %i 99 aligned_slv "2018-03-21 14:45:14" ambig_slv %f 0 ann_src_slv "EMBL; RDP; RNAmmer;" author "Bentley S.D.; Corton C.; Barron A.; Clark L.; Doggett J.; Harris B.; Ormond D.; Quail M.A.; Brown S.E.; Knudson D.; Francis D.; Parkhill P.; Ishimaru C.; ; " date "2008-02-12; 2015-02-06;" description "Clavibacter michiganensis subsp. sepedonicus complete genome" embl_class "Standard" embl_division "Prokaryotes" habitat_slv "plant-associated habitat" homop_slv %f 0.27 homop_events_slv %i 4 insdc %i 184 journal "J. Bacteriol. 190:2150-2160 (2008)" nuc_gene_slv %i 1515 nuc_region "1297189..1298706" nuc_rp "1-3258645" pintail_slv %i 100 publication_doi "10.1128/JB.01598-07" pubmed_id "18192393" seq_quality_slv %i 95 strain "ATCC33113 e[G] l[T] r[T] s[T]" sub_species "sepedonicus" submit_author "Bentley S.D.; ; " submit_date "09-JAN-2008 Bentley S.D., Pathogen Sequencing, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UNITED KINGDOM." tax_xref_embl "31964" title "Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation" vector_slv %f 0 ARB_color %i 12 fullname_ltp "Clavibacter michiganensis subsp. sepedonicus" hi_tax_ltp "Microbacteriaceae" phyl_ltp "Bacteria/Actinobacteria/Actinobacteria/Microccocales and Actinomycetaceae/Microbacteriaceae" rel_ltp "s100" riskgroup_ltp "1, p2" url_lpsn_ltp "http://www.bacterio.net/clavibacter.html" align_family_slv "DQ256087.1:0.91 DQ372937.1:0.89 AB778260.1:0.89 GQ379228.1:0.88 AY273185.1:0.88 FJ425902.1:0.88 AF105422.1:0.88 FJ528304.1:0.86 AY684123.1:0.85 FJ527420.1:0.84 AY228479.1:0.84 KU719509.1:0.76 L09178.1:0.7 DQ413148.1:0.69 FJ425909.1:0.69 AJ420330.1:0.68 " align_filter_slv "" align_log_slv "scoring: raw=-4018, weight=-4058, query-len=1518, aligned-bases=1517, score=0.990143; " align_startpos_slv %i 1004 align_stoppos_slv %i 43284 nuc %i 1518 turn_slv "none" ARB_treetax "Bacteria/Actinobacteria/Actinobacteria/Microccocales and Actinomycetaceae/Microbacteriaceae" %) /*species*/ species %% (% ali_16s %% (% data :7000 "CUGGCUCAGGACGAACGCUGGCGGCGUGCUUAACACAUGCAAGUCGAGCGGAA-AGG----CCCUUCGGGG-----UACUCGAGCGGCGAACGGGUGAGUAACACGUGGGCACCUACCCCCAGCACCGGGAUAACCCCGGGAAACCGGGGCUAAUACCGGAUA--GUGGCAUCACGAAAGC--------UUUU------GCGGCUGGGGAUGGGCCCGCGGCCUAUCAGCUUGUUGGUGGGGUAACGGCCUACCAAGGCGACGACGGGUAGCCGGCCUGAGAGGGCGACCGGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCGCAAUGGGCGAAAGCCUGACGCAGCGACGCCGCGUGGGGGAAGAAGGCCUUCGGGUUGUAAACCCCUUUCAGCAGGAACGAAG-C--------GAAA---------G--UGACGGUACCUGCAGAAGAAGCACCGGCUAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGGUGCAAGCGUUGUCCGGAUUUACUGGGCGUAAAGAGCUCGUAGGCGGUCUGUCGCGUCGGAUGUGAAAACCCAGGGCUCAACCCUGGGCCUGCAUUCGAUACGGGCAGACUAGAGUGCGGCAGGGGAGACUGGAAUUCCUGGUGUAGCGGUGAAAUGCGCAGAUAUCAGGAGGAACACCGGUGGCGAAGGCGGGUCUCUGGGCCGCAACUGACGCUGAGGAGCGAAAGCGUGGGGAGCGAACAGGAUUAGAUACCCUGGUAGUCCACGCUGUAAACGUUGGGCGCUAGGUGUGGGGGACUUCCAGUCCUCCGUGCCGCAGCUAACGCAUUAAGCGCCCCGCCUGGGGAGUACGGCCGCAAGGCUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGCGGAGCAUGUGGCUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGGCUUGACAUGAGGGAAAUCCGGCAGAGAUGCCGGGU--CCGCAAGG-GCC-CUGCACAGGUGGUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUCGUCCCAUGUUGCCAGCGGGUAAUGCCGGGGACUCAUGGGAGACUGCCGGGGUCAACUCGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGCCCCUUACGUCCAGGGCUGCACACAUGCUACAAUGGCCGGUACAAAGGGCUGCGAAACCGUGAGGUGGAGCGAAUCCCAAAAAGCCGGUCUCAGUUCGGAUCGGGGUCUGCAACUCGACCCCGUGAAGUCGGAGUCGCUAGUAAUCGCGGAUCAGAAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGUCACGAAAGUCGGUAACACCCGAAGCCGGUGGCCCAACCGCAAGGAGGGAGCCGUCGAAGGUGGGACCGGCGAUUGGGACGAAGUCGUA" %) /*ali_16s*/ name :7600 "AcsCell2" full_name "Acidothermus cellulolyticus 11B" acc "CP000481" tax_slv "Bacteria;Actinobacteria;Actinobacteria;Frankiales;Acidothermaceae;Acidothermus;" start %i 1397655 stop %i 1399163 version %i 1 tax_embl "Bacteria;Actinobacteria;Acidothermales;Acidothermaceae;Acidothermus;" tax_embl_name "Acidothermus cellulolyticus 11B" tax_greengenes "k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;" tax_greengenes_name "Acidothermus cellulolyticus 11B" tax_ltp "Bacteria;Actinobacteria;Actinobacteria;Acidothermales;Acidothermaceae;Acidothermus" tax_ltp_name "Acidothermus cellulolyticus" tax_rdp "Bacteria;\"Actinobacteria\";Actinobacteria;Actinobacteridae;Actinomycetales;Frankineae;Acidothermaceae;Acidothermus;" tax_rdp_name "Acidothermus cellulolyticus" align_bp_score_slv %i 124 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 90.149460 align_quality_slv %i 96 aligned_slv "2018-03-21 14:21:41" ambig_slv %f 0 ann_src_slv "EMBL;" author "Barabote R.D.; Xie G.; Leu D.H.; Normand P.; Necsulea A.; Daubin V.; Medigue C.; Adney W.S.; Xu X.C.; Lapidus A.; Parales R.E.; Detter C.; Pujic P.; Bruce D.; Lavire C.; Challacombe J.F.; Brettin T.S.; Berry A.M.; ; " culture_collection "ATCC:43068" date "2006-11-15; 2014-05-15;" description "Acidothermus cellulolyticus 11B, complete genome." embl_class "Standard" embl_division "Prokaryotes" habitat_slv "hot spring" homop_slv %f 0.33 homop_events_slv %i 5 insdc %i 16097 journal "Genome Res. 19:1033-1043 (2009)" nuc_gene_slv %i 1507 nuc_region "1397655..1399163" nuc_rp "1-2443540" pintail_slv %i 100 publication_doi "10.1101/gr.084848.108" pubmed_id "19270083" seq_quality_slv %i 94 strain "11B; ATCC 43068 e[G] l[T] r[T] s[T]" submit_author "Copeland A.; Lucas S.; Lapidus A.; Barry K.; Detter J.C.; Glavina del Rio T.; Hammon N.; Israni S.; Dalin E.; Tice H.; Pitluck S.; Zharchuk I.; Schmutz J.; Larimer F.; Land M.; Hauser L.; Kyrpides N.; Mikhailova N.; Berry A.M.; Adney W.S.; Normand P.; Leu D.; Pujic P.; Richardson P.; ; " submit_date "27-OCT-2006 US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA" tax_xref_embl "351607" title "Complete genome of the cellulolytic thermophile Acidothermus cellulolyticus 11B provides insights into its ecophysiological and evolutionary adaptations" vector_slv %f 0 ARB_color %i 10 fullname_ltp "Acidothermus cellulolyticus" hi_tax_ltp "Acidothermaceae" phyl_ltp "Bacteria/Actinobacteria/Actinobacteria" type_ltp "type sp." rel_ltp "s93" riskgroup_ltp "1" url_lpsn_ltp "http://www.bacterio.net/acidothermus.html" NJ_support_pk4_ltp "NJ_support" align_family_slv "DQ256087.1:0.82 AB778260.1:0.82 AY273185.1:0.82 FJ528304.1:0.81 GQ379228.1:0.81 AF105422.1:0.81 DQ372937.1:0.81 KU719509.1:0.81 FJ425902.1:0.8 AY684123.1:0.78 FJ527420.1:0.78 AY228479.1:0.77 L09178.1:0.72 AF399969.1:0.7 DQ413148.1:0.7 AJ011506.1:0.7 " align_filter_slv "" align_log_slv "scoring: raw=-3876.31, weight=-4003.5, query-len=1509, aligned-bases=1509, score=0.968231; " align_startpos_slv %i 1010 align_stoppos_slv %i 43283 nuc %i 1509 turn_slv "none" ARB_treetax "Bacteria/Actinobacteria/Actinobacteria" %) /*species*/ species %% (% ali_16s %% (% data :7000 "CUGGCUCAGGACGAACGCUGGCGGCGUGCCUAAUGCAUGCAAGUCGAACGAU----------UCUUCGGA---------AUGAGUGGCGCACGGCUGAGGAACACGUGACUACCUACCCCGGUGUGGGGGAUAACGGGUCGAAAGACUCGCUAAUCCCGCAUACGAUC--CGCCUGAAAG---------CCGU--AGGCGCACU--GGGCGGGGGUCGCGUCCCAUUAGAUAGUUGGUGUGGUAAUGGCGCACCAAGUCGAUGAUGGGUCUCUGGUCUGAGAGGACGACCAGACAGAUUGGGACUGAGACACGGCCCAAACUCCUACGGGGGGCAGCAGCAAGGAAUUUUCGGCAAUGGGCGCAAGCCUGACCGAGCAACGCCGCGUGGAGGAUGACGGCUUU-GGGUUGUAAACUCCUUUUGGGGGGGACGA-------------UAA------------UGACGGUACCCUCCGAAUCAGGCCCGGCUAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGGGCCAAGCGUUGUCCGGAAUUACUGGGCGUAAAGCGUGGGUAGGUGGUCGAUGAUGUGCCGCGUGAAAGCGCCGGAGUAAUGCCGGCGGUCGCGGUAGACAC-GUU-GACUAGAGGCUCGCAGAGGAACGUGGAAUUCCCGGUGUAGUGGUGAAAUGCGUAGAUAUCGGGAGGAACACCAGUGGCGCAAGCGGCGUUCUGGGCGAGACCUGACACUGAGCCACGACGGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCAGUAAACGAUGCAUACCAGGUGUGGGAUGCUUCGCUCGUUCCGUGCCGCAGCUUACGCGAUGAGUAUGCCGCCUGGGGACUACGAGCGCAAGCUUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCAGCGGAGCGUGUGGUUUAAUUCGACGCAACGCGAAGAACCUUACCUAGUCUUGACAUGCACUGCAAGCUUCGGAAAUGAAGUCG--CCUUCGAG-GGUGUGCUACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCUGUGAGGUGUUACAA--GUGUCA---------CUC-----AGACUGCCGUUGUCAAAACGGAGGAAGGCGGGGAUGACGUCAAGUCCGCAUGGCCCUUACGACUAGGGCGACACACACGCUACAAUGGCUGGGAGAAUGCGCCGCGACCUGGCAACAGGCAGCGAAUCGAG-AACACCAGUCACAGUUCAGAUUGGGGGCUGCAACUCGCCCCCAUGAAGGCGGAGUUGCUAGUAAUCGCCGGUCAGCAUACGGCGGUGAAUCAGUACCCGGGCCUUGUACACACCGCCCGUCACGUCAUGGAAGUGGGAAACACCUGAAGUCCGUGGGCUAACCGCAAGGAGGCAGCGGCCGAGGGUGGGGCUCGUAACUGGGACGAAGUCGUA" %) /*ali_16s*/ name :7600 "HrpAura2" full_name "Herpetosiphon aurantiacus DSM 785" acc "CP000875" tax_slv "Bacteria;Chloroflexi;Chloroflexia;Chloroflexales;Herpetosiphonaceae;Herpetosiphon;" start %i 1974899 stop %i 1976373 version %i 1 tax_embl "Bacteria;Chloroflexi;Chloroflexia;Herpetosiphonales;Herpetosiphonaceae;Herpetosiphon;" tax_embl_name "Herpetosiphon aurantiacus DSM 785" tax_greengenes "k__Bacteria;p__Chloroflexi;c__Chloroflexi;o__Herpetosiphonales;" tax_greengenes_name "Herpetosiphon aurantiacus DSM 785" tax_ltp "Bacteria;Chloroflexi;Chloroflexia;Herpetosiphonales;Herpetosiphonaceae;Herpetosiphon" tax_ltp_name "Herpetosiphon aurantiacus" tax_rdp "Bacteria;\"Chloroflexi\";Chloroflexia;\"Herpetosiphonales\";\"Herpetosiphonaceae\";Herpetosiphon;" tax_rdp_name "Herpetosiphon aurantiacus" align_bp_score_slv %i 111 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 73.481384 align_quality_slv %i 83 aligned_slv "2018-03-21 14:20:37" ambig_slv %f 0 ann_src_slv "EMBL;" author "Kiss H.; Nett M.; Domin N.; Martin K.; Maresca J.A.; Copeland A.; Lapidus A.; Lucas S.; Berry K.W.; Glavina Del Rio T.; Dalin E.; Tice H.; Pitluck S.; Richardson P.; Bruce D.; Goodwin L.; Han C.; Detter J.C.; Schmutz J.; Brettin T.; Land M.; Hauser L.; Kyrpides N.C.; Ivanova N.; Goker M.; Woyke T.; Klenk H.P.; Bryant D.A.; ; " culture_collection "ATCC:23779" date "2007-11-15; 2013-12-12;" description "Herpetosiphon aurantiacus DSM 785, complete genome." embl_class "Standard" embl_division "Prokaryotes" habitat_slv "freshwater habitat" homop_slv %f 0.68 homop_events_slv %i 7 insdc %i 16523 journal "Stand Genomic Sci 5:356-370 (2011)" nuc_gene_slv %i 1474 nuc_region "1974899..1976373" nuc_rp "1-6346587" pintail_slv %i 75 publication_doi "10.4056/sigs.2194987" pubmed_id "22675585" seq_quality_slv %i 88 strain "e[G] l[T] r[T] s[T]" submit_author "Copeland A.; Lucas S.; Lapidus A.; Barry K.; Glavina del Rio T.; Dalin E.; Tice H.; Pitluck S.; Kiss H.; Brettin T.; Bruce D.; Detter J.C.; Han C.; Schmutz J.; Larimer F.; Land M.; Hauser L.; Kyrpides N.; Kim E.; Bryant D.; Richardson P.; ; " submit_date "30-OCT-2007 US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA" tax_xref_embl "316274" title "Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T))" vector_slv %f 0 ARB_color %i 10 fullname_ltp "Herpetosiphon aurantiacus" hi_tax_ltp "Herpetosiphonaceae" phyl_ltp "Bacteria/Chloroflexi/Chloroflexia/Herpetosiphonales" type_ltp "type sp." rel_ltp "s102" riskgroup_ltp "1" url_lpsn_ltp "http://www.bacterio.net/herpetosiphon.html" NJ_support_pk4_ltp "NJ_support" align_family_slv "KU719509.1:0.69 L09178.1:0.68 AY273185.1:0.67 FJ528304.1:0.66 DQ256087.1:0.66 AB778260.1:0.65 AJ420330.1:0.65 FJ425909.1:0.65 DQ372937.1:0.65 AF105422.1:0.65 X95919.1:0.64 Y10757.1:0.64 X95920.1:0.64 X95918.1:0.64 FR733718.1:0.64 AF208315.1:0.64 " align_filter_slv "" align_log_slv "shifting bases to fit in 1 bases at pos 1772 to 1772;shifting bases to fit in 2 bases at pos 16298 to 16299;total inserted bases=8;longest insertion=3;total inserted bases before shifting=1;scoring: raw=-3184.62, weight=-3813.5, query-len=1475, aligned-bases=1475, score=0.835092; " align_startpos_slv %i 1006 align_stoppos_slv %i 43282 nuc %i 1475 turn_slv "none" ARB_treetax "Bacteria/Chloroflexi/Chloroflexia/Herpetosiphonales" %) /*species*/ species %% (% ali_16s %% (% data :7000 "NUGGCUCAGGACGAACGCUGGCGGCGUGCCUAACACAUGCAAGUCGAACGAG--AUU-U--UAGCA--AUAA-A---AUCUUAGUGGCGAACGGGUGAGUAACGCGUAGACACCUGCCUUCUAGCUGGGGACAACACCGCGAAAGUGGUGCUAAUACCGAAUGU-AGUGCAUGCUUAAAGGUGGCCUCUUUAUAAGCUAUCACUAGAAGAUGGGUCUGCGUCUGAUUAGCUAGUUGGUGAGGUAAUGGCUCACCAAGGCGACGAUCAGUAGCCGGUCUGAGAGGAUGAACGGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUCUUCCGCAAUGGACGAAAGUCUGACGGAGCAACGCCGCGUGAGUGAAGAAGGUUUUCGGAUCGUAAAACUCUGUUUUCAGGGACGAAUGUUGGAUUGUAAAUAAUGAUUCAUAAUGACGGUACCUGACAAGAAAGCCACGGCUAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGUGGCAAGCGUUGUCCGGAAUUAUUGGGCGUAAAGCGCGCGCAGGUGGGAUAAUCAGUCUGAUGUUAAAGUUCGGGGCUUAACCCCGUGA-AGCAUUGGAUACUGUUAUUCUUGAGUGCAGGAGAGGAAAGUGGAAUUCCUAGUGUAGCGGUGAAAUGCGUAGAUAUUAGGAGGAACACCAGUGGCGAAGGCGACUUUCUGGACUGUGUCUGACACUGAGGCGCGAAAGCCAGGGUAGUGAACGGGAUUAGAUACCCCGGUAAUCCUGGCCGUAAACGAUGGGUACUAGGUGUUGGGGGUAUCGACCCUCCAGUGCCGGAGUUAACGCAAUAAGUACCCCGCCUGGGGAGUACGGCCGCAAGGUUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGUAUGUGGUUUAAUUCGACGCAACGCGAAGAACCUUACCAAGGCUUGACAUCGUCUGAUGACUCUAGAGAUAGGUUCU--CCUUCGGGAGCAGAUAGACAGGUGGUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUAUGUUGCCAGCACGUAAUGGUGGGAACUCAUGGGAGACUGCCGUGGAUAACACGGAG-AAGGUGGGGAUGACGUCAAGUCAUCAUGCCCCUUAUGUCUUGGGCUACACACGUACUACAAUGGCUUAAAUAGAGGGUAGCGAAGCCGCGAGGUGAAGCCAAACCCAAAAACAAGCUCUCAGUUCGGAUUGCAGGCUGCAACUCGCCUGCAUGAAGUCGGAAUCGCUAGUAAUCGCAGAUCAG-AUGCUGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCACGAAAGUUGAGAGCACCCGAAGCCGGUGAGGUAACCGAAUGGAACCAGCCGUCGAAGGUGAGAUCAGUGAUUGGGGUGAAGUCGUA" %) /*ali_16s*/ name :7600 "PesPropi" full_name "Pelosinus propionicus" acc "AM258975" tax_slv "Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Pelosinus;" start %i 1 stop %i 1580 version %i 1 tax_embl "Bacteria;Firmicutes;Negativicutes;Selenomonadales;Sporomusaceae;Pelosinus;" tax_embl_name "Pelosinus propionicus" tax_greengenes "k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Veillonellaceae;g__Pelosinus;" tax_greengenes_name "Pelosinus propionicus" tax_ltp "Bacteria;Firmicutes;Negativicutes;Selenomonadales;Sporomusaceae;Pelosinus" tax_ltp_name "Pelosinus propionicus" tax_rdp "Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Pelosinus;" tax_rdp_name "Pelosinus propionicus" align_bp_score_slv %i 116 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 25 align_ident_slv %f 77.514793 align_quality_slv %i 86 aligned_slv "2018-03-21 13:56:34" ambig_slv %f 0.13 ann_src_slv "EMBL; RDP; RNAmmer;" author "Boga H.I.; Ji R.; Ludwig W.; Brune A.; ; " country "Republic of the Congo" date "2007-01-02; 2007-01-02;" description "Sporotalea propionica partial 16S rRNA gene, type strain TmPN3T" embl_class "Standard" embl_division "Prokaryotes" gene "16S rRNA" habitat_slv "intestinal tract of Thoracotermes macrothorax" homop_slv %f 0.2 homop_events_slv %i 3 host "Termite" isolation_source "Thoracotermes macrothorax" journal "Arch. Microbiol. 187:15-27 (2007)" nuc_gene_slv %i 1549 nuc_region "1..1580" nuc_rp "1-1580" pintail_slv %i 100 publication_doi "10.1007/s00203-006-0168-7" pubmed_id "17031618" seq_quality_slv %i 94 strain "type strain:TmPN3=DSM 13327=ATCC BAA-626 l[T] r[T] s[T]" submit_author "Brune A.; ; " submit_date "07-APR-2006 Brune A., Dept. of Biogeochemistry, MPI for Terrestrial Microbiology, Karl-von-Frisch-Strasse, 35043 Marburg, GERMANY." tax_xref_embl "380084" title "Sporotalea propionica gen. nov. sp. nov., a hydrogen-oxidizing, oxygen-reducing, propionigenic firmicute from the intestinal tract of a soil-feeding termite" vector_slv %f 0 ARB_color %i 12 fullname_ltp "Pelosinus propionicus" hi_tax_ltp "Sporomusaceae" phyl_ltp "Bacteria/Firmicutes, Tenericutes, Negativicutes and Cyanobacteria/Negativicutes/Selenomonadales and Veillonellales" rel_ltp "s93" riskgroup_ltp "1" url_lpsn_ltp "http://www.bacterio.net/pelosinus.html" NJ_support_pk4_ltp "NJ_support" align_family_slv "L09178.1:0.72 DQ256087.1:0.72 AY273185.1:0.72 AF105422.1:0.71 FJ425902.1:0.71 DQ372937.1:0.71 AB778260.1:0.71 AJ420330.1:0.71 FJ528304.1:0.71 FR733718.1:0.71 FR749942.1:0.71 AF208315.1:0.7 AF192343.1:0.7 FR749910.1:0.7 X95918.1:0.7 Y10760.1:0.7 " align_filter_slv "" align_log_slv "shifting bases to fit in 1 bases at pos 9907 to 9907;shifting bases to fit in 3 bases at pos 32523 to 32525;total inserted bases=10;longest insertion=4;total inserted bases before shifting=1;scoring: raw=-3488.5, weight=-4042.88, query-len=1580, aligned-bases=1555, score=0.862876; " align_startpos_slv %i 1006 align_stoppos_slv %i 43312 nuc %i 1580 turn_slv "none" ARB_treetax "Bacteria/Firmicutes, Tenericutes, Negativicutes and Cyanobacteria/Negativicutes/Selenomonadales and Veillonellales" %) /*species*/ species %% (% ali_16s %% (% data :7000 "............CAAAG-UGCCA---CCCCUCAUACGGGAGAGUCGAACUAG--GAU-UGAGUGUU-AA-G--AA-UUAGUUAGUGGCGGACGGGUGAGUAACGCGUGGAUACCUACCUAGUAGACCGGGACAACCCUUGGAAACGAGGGCUAAUACCGGAUAAGGUGGCAUCACGAAAGAUGGC--CCUGAAGAGCUAUCGUUAGUAGAUGGAUCCGCGUCUGAUUAGCUAGUUGGUGGGGUAAAGGCCUACCAAGGCGACGAUCAGUAGCCGGCCUGAGAGGGUGAACGGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUCUUCCGCAAUGGACGAAAGUCUGACGGAGCAACGCCGCGUGUACGACGAAGGCCUUCGGGUUGUAAAGUACUGUCUUCAGGGACGAAGGUAAGUAUGUAAAGA-UGUACUUACAUGACGGUACCUGAGGAGGAAGCCCCGGCUAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGGGGCAAGCGUUGUCCGGAAUCAUUGGGCGUAAAGGGCGCGUAGGCGGAUACUUAAGUCUGGUGUGAAAACCUAGGGCUCAACCCUGGGACUGCAUCGGAAACUGGGUAUCUUGAGGACAGGAGAGGAAAGUGGAAUUCCACGUGUAGCGGUGAAAUGCGUAGAUAUGUGGAGGAACACCAGUGGCGAAGGCGACUUUCUGGACUGUAACUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGAGUGCUAGGUGUAGAGGGUAUCGACCCUUCUGUGCCGCAGUUAACACACUAAGCACUCCGCCUGGGGAGUACGGCCGCAAGGUUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGACGCAACGCGAAGAACCUUACCAAGGCUUGACAUCCAUAGAAUCCUGUGGAAACAUGGGAGUGCCUUCGGGAGCUAUGAGACAGGUGGUGCAUGGUUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCUAUGUUUAGUUGCUAACGCGUAAUGGUGAGCACUCUAGACAGACUGCCGGUGACAAACCGGAGGAAGGUGGGGAUGACGUCAAAUCAUCAUGCCCCUUAUGUCUUGGGCUACACACGUGCUACAAUGGCCAGUACAGACGGAAGCGAAGCCGUGAGGUGAAGCCAAUCCGAGAAAGCUGGUCUCAGUUCGGAUUGUUCUCUGCAACUCGAGAACAUGAAGUCGGAAUCGCUAGUAAUCGCAGGUCAG-AUACUGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCACGAAAGUCUGCAACACCCGAAGCCGGUGAGGUAACCGAAAGGAGCUAGCCGUCGAAGGUGGGGCCGAUGAUUGGGGUGAAGUCGUA" %) /*ali_16s*/ name :7600 "DstHafn2" full_name "Desulfitobacterium hafniense DCB-2" acc "CP001336" tax_slv "Bacteria;Firmicutes;Clostridia;Clostridiales;Peptococcaceae;Desulfitobacterium;" start %i 3389423 stop %i 3391083 version %i 1 tax_embl "Bacteria;Firmicutes;Clostridia;Clostridiales;Peptococcaceae;Desulfitobacterium;" tax_embl_name "Desulfitobacterium hafniense DCB-2" tax_greengenes "k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfosporosinus;s__meridiei;" tax_greengenes_name "Desulfitobacterium hafniense DCB-2" tax_ltp "Bacteria;Firmicutes;Clostridia;Clostridiales;Peptococcaceae;Desulfitobacterium" tax_ltp_name "Desulfitobacterium hafniense" tax_rdp "Bacteria;Firmicutes;Clostridia;Clostridiales;Peptococcaceae 1;Desulfitobacterium;" tax_rdp_name "Desulfitobacterium hafniense" align_bp_score_slv %i 114 align_cutoff_head_slv %i 113 align_cutoff_tail_slv %i 0 align_ident_slv %f 79.802635 align_quality_slv %i 91 aligned_slv "2018-03-21 13:55:32" ambig_slv %f 0 ann_src_slv "EMBL; RNAmmer;" author "Kim S.H.; Harzman C.; Davis J.K.; Hutcheson R.; Broderick J.B.; Marsh T.L.; Tiedje J.M.; ; " date "2009-01-07; 2014-05-15;" description "Desulfitobacterium hafniense DCB-2, complete genome." embl_class "Standard" embl_division "Prokaryotes" habitat_slv "sludge" homop_slv %f 0.12 homop_events_slv %i 2 insdc %i 205 journal "BMC Microbiol. 12:21-21 (2012)" nuc_gene_slv %i 1554 nuc_region "3389423..3391083" nuc_rp "1-5279134" pintail_slv %i 95 publication_doi "10.1186/1471-2180-12-21" pubmed_id "22316246" seq_quality_slv %i 97 strain "DCB-2 e[G] l[T] r[T] s[T]" submit_author "Lucas S.; Copeland A.; Lapidus A.; Glavina del Rio T.; Dalin E.; Tice H.; Bruce D.; Goodwin L.; Pitluck S.; Chertkov O.; Brettin T.; Detter J.C.; Han C.; Kuske C.R.; Larimer F.; Land M.; Hauser L.; Kyrpides N.; Ovchinnikova G.; Madsen T.; Christiansen N.; Ahring B.; Marsh T.; Harzman C.; Davis J.K.; Kim S.-H.; Tiedje J.M.; ; " submit_date "29-DEC-2008 US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA" tax_xref_embl "272564" title "Genome sequence of Desulfitobacterium hafniense DCB-2, a Gram-positive anaerobe capable of dehalogenation and metal reduction" vector_slv %f 0 ARB_color %i 12 fullname_ltp "Desulfitobacterium hafniense" hi_tax_ltp "Peptococcaceae" phyl_ltp "Bacteria/Firmicutes, Tenericutes, Negativicutes and Cyanobacteria/Other Peptococcaceae" rel_ltp "s104" riskgroup_ltp "1" url_lpsn_ltp "http://www.bacterio.net/desulfitobacterium.html" align_family_slv "AY273185.1:0.76 FJ425909.1:0.76 FJ528304.1:0.75 DQ256087.1:0.75 AJ420330.1:0.75 AF105422.1:0.75 L09178.1:0.75 FJ425902.1:0.74 DQ372937.1:0.74 AB778260.1:0.74 AJ011506.1:0.73 AF208315.1:0.73 GQ379228.1:0.73 FR733718.1:0.73 FR749942.1:0.73 X95918.1:0.73 KU719509.1:0.73 DQ413148.1:0.73 KX602193.1:0.73 AY684123.1:0.73 X99469.1:0.73 X94198.1:0.73 FJ527420.1:0.73 AB201043.1:0.72 GU993265.1:0.72 Y10763.1:0.72 Y10756.1:0.72 Y10754.1:0.72 AF192343.1:0.72 Y10762.1:0.72 Y10757.1:0.72 X95920.1:0.72 Y10759.1:0.72 X95921.1:0.72 Y10758.1:0.72 Y10755.1:0.72 Y10760.1:0.72 X95919.1:0.72 FR749910.1:0.72 AF399969.1:0.72 " align_filter_slv "" align_log_slv "shifting bases to fit in 1 bases at pos 1106 to 1106;shifting bases to fit in 2 bases at pos 1113 to 1114;shifting bases to fit in 2 bases at pos 1137 to 1138;shifting bases to fit in 1 bases at pos 5207 to 5207;total inserted bases=11;longest insertion=3;total inserted bases before shifting=1;scoring: raw=-3600.87, weight=-3921.6, query-len=1661, aligned-bases=1548, score=0.918216; " align_startpos_slv %i 892 align_stoppos_slv %i 43277 nuc %i 1661 turn_slv "none" ARB_treetax "Bacteria/Firmicutes, Tenericutes, Negativicutes and Cyanobacteria/Other Peptococcaceae" %) /*species*/ species %% (% ali_16s %% (% data :7000 "CUGGCUCAGGGUGAACGCUGGCGGCGCGCCUAACACAUGCAAGUCGAACGAG--AAAGGGU-AGCUUGCUACCC-GAGUAAGAGUGGCGAACGGGUGAGUAAAGCGUAGGAAUCUGCCCAAAGGACCGGGAUAACUGCUGGAAACGGUAGAUAAGACCGGAUAAGCCCGAGAGGGGAAAGU--------AUCG--GAGAUAGCCGAAGGAGGGGCCUACGUCCCAUCAGGUAGUUGGAAGUGUAAGAGACUCCCAAGCCGACGACGGGUAGCCGAUGUGAGAGCAUGAUCGGCCACAAGGGCACUGAGACACGGGUCCUACUCCUACGGGAGGCAGCAGUGGGGAAUUUUGGACAAUGGACGGAAGUCUGAUCCAGCGACGCCGCGUGAAGGAAGAAGUCCUUGGGAU-GUAAACUUCUGAACUUAUCAAUAAAGACAACUGGGGACAG----UUGGA---UGAAGGUAGAUAAAGAA-AAGCCCCGGCUAACUACGUGCCAGCAGCCGCGGUAAGACGUAGGGGGCGAGCGUUGCCCGGAAUUACUGGGCGUAUNGGGGGCGUAGGCGGUCAAAUAAGUCAGAUGUGAAAUACUACUGCUCAACGGUAGAAAUGCGUUUGAAACUGUAAGACUUGAGGGUACCAAAGGUAGACGGAAUUACCUGAGUAGGGGUGAAAUCCGUAGAUACAGGUAAGAACGCCGU-GGGGAAGCCGGUCUACUGGGGUAACCCUGACGCUGAGGCCCGAAAGCUAGGGGAGCGAACCGGAUUAGAUACCCGGGUAGUCCUAGCAGUAAACGAUGCUCACUAGGUGU-GGAG--AGUGAAUUCUCCGUGCUGAAGCGAACGCGAUAAGUGAGCCGCCUGGGGAGUACGGCCGCAUGGCUGAAACUCAAAGGAAUUGACGGGGGUCCGCACAAGCGGNGGAGCAUGUGGUUUAAUUCGAAGCAAC-CGAAGAACCUUACCAGGNAAUGACAUGGAGAUAAGGGUAUAGAGAUAUAUCCANGACUUAGGUCAGUCUCACACAGGUGANGCACGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCACAACGAGCGCAACCCCUACCAUUAGUUGCCAGCGAGUAAAGUUGGGCACUCUAAUGGGACAGCCGUCG-CGAGUCGGAGGAAGGAGGGGAUGACGUCAGGUAAGCGUGCCCCUUAUGCUCUGGGCGACACACGUGCUACAAUGGUACGGGCAGAGGGCAGCGAAACUGUGAAGUGAAGCG-AGAUCUAAAAACGUGCCGUAAUUCGGAGUGUAGUCUG-AAC-CGACUACAUGAAACCGGAAUNGCUAGUAAUCGCAGGUCAGCAAACUGCGGUGAAUACGUUCCCGGACCUUGUACACACCGCCCGUCACGCCACCGGAGUUGGAGACGCCCGAAAAUGGUAGCAUAACCGCAAGGAGUGAGAAC-UUACAGGAAAAGGAGCGA---GGCCA--------" %) /*ali_16s*/ name :7600 "OcgTerie" full_name "Oceanotoga teriensis" acc "EU588727" tax_slv "Bacteria;Thermotogae;Thermotogae;Petrotogales;Petrotogaceae;Oceanotoga;" start %i 1 stop %i 1469 version %i 1 tax_embl "Bacteria;Thermotogae;Thermotogales;Thermotogaceae;Oceanotoga;" tax_embl_name "Oceanotoga teriensis" tax_greengenes "k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Geotoga;" tax_greengenes_name "Oceanotoga teriensis" tax_ltp "Bacteria;Thermotogae;Thermotogae;Petrotogales;Petrotogaceae;Oceanotoga" tax_ltp_name "Oceanotoga teriensis" tax_rdp "Bacteria;\"Thermotogae\";Thermotogae;Petrotogales;Petrotogaceae;Oceanotoga;" tax_rdp_name "Oceanotoga teriensis" align_bp_score_slv %i 105 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 69.761269 align_quality_slv %i 82 aligned_slv "2018-03-21 13:53:08" ambig_slv %f 0.41 ann_src_slv "EMBL; RDP; RNAmmer;" author "Jayasinghearachchi H.S.; Lal B.; ; " country "India" date "2008-04-08; 2012-11-14;" description "Oceanotoga teriensis strain OCT74 16S ribosomal RNA gene, partial sequence." embl_class "Standard" embl_division "Prokaryotes" homop_slv %f 0.27 homop_events_slv %i 4 isolation_source "oil production wells" journal "Int. J. Syst. Evol. Microbiol. 61:554-560 (2011)" nuc_gene_slv %i 1469 nuc_region "1..1469" nuc_rp "1-1469" pintail_slv %i 100 publication_doi "10.1099/ijs.0.018036-0" pubmed_id "20382783" seq_quality_slv %i 88 strain "OCT74 l[T] r[T] s[T]" submit_author "Jayasinghearachchi H.S.; Lal B.; Sarma P.M.; ; " submit_date "12-MAR-2008 Microbial Biotechnology, The Energy and Resource Institute, Habitat Place, Lordhi Road, Nwe Delhi 110003, India" tax_xref_embl "515440" title "Oceanotoga teriensis gen. nov., sp. nov., a thermophilic bacterium isolated from offshore oil-producing wells" vector_slv %f 0 ARB_color %i 10 fullname_ltp "Oceanotoga teriensis" hi_tax_ltp "Petrotogaceae" phyl_ltp "Bacteria/Thermotogae/Petrotogales" type_ltp "type sp." rel_ltp "s106" url_lpsn_ltp "http://www.bacterio.net/oceanotoga.html" align_family_slv "KP261822.1:0.58 KX602193.1:0.54 FJ425909.1:0.53 AJ011506.1:0.53 AB201043.1:0.53 AJ420330.1:0.53 DQ413148.1:0.53 DQ372937.1:0.51 AB778260.1:0.51 DQ256087.1:0.51 FJ425902.1:0.5 FJ528304.1:0.5 AY273185.1:0.5 AF105422.1:0.5 L09178.1:0.48 KX870191.1:0.47 " align_filter_slv "" align_log_slv "shifting bases to fit in 1 bases at pos 9884 to 9884;shifting bases to fit in 1 bases at pos 15640 to 15640;total inserted bases=8;longest insertion=2;total inserted bases before shifting=1;scoring: raw=-3054.69, weight=-3705.38, query-len=1469, aligned-bases=1469, score=0.824394; " align_startpos_slv %i 1012 align_stoppos_slv %i 43231 nuc %i 1469 turn_slv "none" riskgroup_ltp "1" ARB_treetax "Bacteria/Thermotogae/Petrotogales" %) /*species*/ species %% (% ali_16s %% (% data :7000 "CUGCCGGAGGCC-ACCGCUAUCGGGGCCGCUAAGCCAUGCAAGUCGAGGGCG--CC--------C-GGCAAU---GGGGGCGCCCGGCGGACGGCUCAGUAACACGUGGGUACCUACCCUCGGGACGGGGAUAACCCCGGGAAAGUGGGGCUAAUCCCCGAUA--GCCGGAAGGUGAAAGGCCCGGGCCCAUGCCGGGUCCGCCCGAGGAUGGGCCUGCGGCCGAUUAGGUAGUUGGCGGGGUAACGGCCCGCCAAGCCGAUAAUCGGUACGGGCGGUGAGAGCCGGAGCCCGGAGACGGGGACUGAGACAAGGCCCCGGGCCCUACGGGGCGCAGCAGGCGCGAAACCUCCGCAAUGCGGGCAACCGCGACGGGGGGACCCCGAGUG-CCGUCGGGGC--AAAGCCCCG--G-CGGCUGUACCGGGGU---------------GUAAAAA-----------------GCCCCGGGAGAAAGCGGCGGC-AAGCCGCUGCCAGCCGCCGCGGUAAUAGCGGCGCCGCAAGUGGUGGCCGCUUUUAUUGGGCCUAAAGGGGCCGUAGCCGGUCCCGUGGGUCCCCGCCGAAAGCCCGCGGCUUAACC-GCGGGAUCGGGGGGAAACUGCGGGACUUGGGACCGGGAGAGGCCGGAGGUACCCCCGGGGUAGGGGUGAAAUCCUGUCAUCCCGGGGGGACCGCCGU-GGCGAAGGCGUCCGGCUGGAAC-GGUCCGACGGUGAGGGCCGAAAGCCGGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCCGGCUGUAAACGAUGCGGACUAGGUGUUGGGGCGCACGACGCCCCAGUGCCGUAGGGAAGCCGUUAAGUCCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUUAAAGGAAUUGGCGGGGGAGCACACAACCGGUGGAGCCUGCGGUUUAAUUGGAUUCAACGCCGGAAACCUUACCGGGGG---CGACGCAGUGAAGGCAGGUGACGACCUGCCG----GACG----AGCUG-AG-AGGAGGUGCAUGGCCGCCGUCAGCUCGUGCCGUGAGGUGUCCUGUUAAGUCAGGUAACGAGCGAGACCCCCGCCCGCAGUUGCCAGCGGGUAACGCCGGGCACUCUGCGGGGAUCGCCGCCG-UAAGGCGGAUGAAAGUGGGGGCGACGGCAGGUCCGUAUGCCCCGAAACCCCCGGGCUACACGCGGGCUACAAUGGCGGGGACAAUGGGAUCCGACCCCGAAAGGGGGAGGA-AUCCCCUAAACCCCGUCGUAGUUCGGAUUGCGGGCUGCAACUCGCCCGCAUGAAGGUGGAAUCGGUAGUAACCGUGCCUCAGAAUGGCACGGUGAAUACGUCCCUGCUCCUUGCACACACCGCCCGUCACGCCACCCGAGCC--CCCCGGGGCAAGCCCCC-GGUC--C-GCAA-G-GGCUGGGGGCGAGCCCCCGGGGGGUGAGGGGGGCGAAGUCGUA" %) /*ali_16s*/ name :7600 "MtpKand2" full_name "Methanopyrus kandleri AV19" acc "AE009439" tax_slv "Archaea;Euryarchaeota;Methanopyri;Methanopyrales;Methanopyraceae;Methanopyrus;" start %i 516778 stop %i 518289 version %i 1 tax_embl "Archaea;Euryarchaeota;Methanopyri;Methanopyrales;Methanopyraceae;Methanopyrus;" tax_embl_name "Methanopyrus kandleri AV19" tax_greengenes "k__Archaea;p__Euryarchaeota;c__Methanopyri;o__Methanopyrales;f__Methanopyraceae;g__Methanopyrus;s__kandleri;" tax_greengenes_name "Methanopyrus kandleri AV19" tax_ltp "Archaea;Euryarchaeota;Methanopyri;Methanopyrales;Methanopyraceae;Methanopyrus" tax_ltp_name "Methanopyrus kandleri" tax_rdp "Archaea;\"Euryarchaeota\";Methanopyri;Methanopyrales;Methanopyraceae;Methanopyrus;" tax_rdp_name "Methanopyrus kandleri" align_bp_score_slv %i 124 align_cutoff_head_slv %i 0 align_cutoff_tail_slv %i 0 align_ident_slv %f 79.776756 align_quality_slv %i 91 aligned_slv "2018-03-21 13:49:53" ambig_slv %f 0 ann_src_slv "EMBL; RNAmmer;" author "Slesarev A.I.; Mezhevaya K.V.; Makarova K.S.; Polushin N.N.; Shcherbinina O.V.; Shakhova V.V.; Belova G.I.; Aravind L.; Natale D.A.; Rogozin I.B.; Tatusov R.L.; Wolf Y.I.; Stetter K.O.; Malykh A.G.; Koonin E.V.; Kozyavkin S.A.; ; " date "2002-07-18; 2014-05-15;" description "Methanopyrus kandleri AV19, complete genome." embl_class "Standard" embl_division "Prokaryotes" habitat_slv "hydrothermal vent" homop_slv %f 1.6 homop_events_slv %i 19 insdc %i 294 journal "Proc. Natl. Acad. Sci. U.S.A. 99:4644-4649 (2002)" nuc_gene_slv %i 1512 nuc_region "516778..518289" nuc_rp "1-1694969" pintail_slv %i 100 publication_doi "10.1073/pnas.032671499" pubmed_id "11930014" seq_quality_slv %i 73 strain "AV19 e[G] l[T] r[T] s[T]" submit_author "Slesarev A.I.; Mezhevaya K.V.; Makarova K.S.; Polushin N.N.; Shcherbinina O.V.; Shakhova V.V.; Belova G.I.; Aravind L.; Natale D.A.; Rogozin I.B.; Tatusov R.L.; Wolf Y.I.; Stetter K.O.; Malykh A.G.; Koonin E.V.; Kozyavkin S.A.; ; " submit_date "04-FEB-2002 Fidelity Systems, Inc., Gaithersburg, MD 20879, USA" tax_xref_embl "190192" title "The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens" vector_slv %f 0 ARB_color %i 10 fullname_ltp "Methanopyrus kandleri" hi_tax_ltp "Methanopyraceae" phyl_ltp "Archaea/Euryarchaeota" type_ltp "type sp." rel_ltp "s100" riskgroup_ltp "1" url_lpsn_ltp "http://www.bacterio.net/methanopyrus.html" NJ_support_pk4_ltp "NJ_support" align_family_slv "DQ060321.1:0.66 L07510.1:0.64 D43628.230:0.61 AB372515.1:0.61 FN594944.1:0.61 AB206954.1:0.61 AB519798.1:0.6 EU887283.1:0.6 AF095272.1:0.6 GQ282624.1:0.6 KC782839.1:0.59 AF262035.1:0.59 AY186542.1:0.59 AB371073.1:0.59 AM039978.1:0.58 AM269467.1:0.58 " align_filter_slv "" align_log_slv "shifting bases to fit in 1 bases at pos 42600 to 42600;total inserted bases=7;longest insertion=2;total inserted bases before shifting=1;scoring: raw=-3375.44, weight=-3681.5, query-len=1512, aligned-bases=1512, score=0.916865; " align_startpos_slv %i 1004 align_stoppos_slv %i 43278 nuc %i 1512 turn_slv "none" ARB_treetax "Archaea/Euryarchaeota" %) /*species*/ %) /*species_data*/ presets %% (% alignment %% (% alignment_name "ali_16s" alignment_len %i 1482 aligned %i 1 alignment_write_security %i 0 alignment_type "rna" alignment_rem "" auto_format %i 1 %) /*alignment*/ use "ali_16s" key_data %% (% key %% (% key_name "name" key_type %i 12 %) /*key*/ key %% (% key_name "acc" key_type %i 12 %) /*key*/ key %% (% key_name "full_name" key_type %i 12 %) /*key*/ key %% (% key_name "tmp" key_type %i 12 %) /*key*/ key %% (% key_name "ARB_color" key_type %i 3 %) /*key*/ key %% (% key_name "ARB_treetax" key_type %i 12 %) /*key*/ key %% (% key_name "NJ_support_pk4_ltp" key_type %i 12 %) /*key*/ key %% (% key_name "ali_16s" key_type %i 15 %) /*key*/ key %% (% key_name "ali_16s/data" key_type %i 12 %) /*key*/ key %% (% key_name "align_bp_score_slv" key_type %i 3 %) /*key*/ key %% (% key_name "align_cutoff_head_slv" key_type %i 3 %) /*key*/ key %% (% key_name "align_cutoff_tail_slv" key_type %i 3 %) /*key*/ key %% (% key_name "align_family_slv" key_type %i 12 %) /*key*/ key %% (% key_name "align_filter_slv" key_type %i 12 %) /*key*/ key %% (% key_name "align_ident_slv" key_type %i 4 %) /*key*/ key %% (% key_name "align_log_slv" key_type %i 12 %) /*key*/ key %% (% key_name "align_quality_slv" key_type %i 3 %) /*key*/ key %% (% key_name "align_startpos_slv" key_type %i 3 %) /*key*/ key %% (% key_name "align_stoppos_slv" key_type %i 3 %) /*key*/ key %% (% key_name "aligned_slv" key_type %i 12 %) /*key*/ key %% (% key_name "ambig_slv" key_type %i 4 %) /*key*/ key %% (% key_name "ann_src_slv" key_type %i 12 %) /*key*/ key %% (% key_name "author" key_type %i 12 %) /*key*/ key %% (% key_name "collected_by" key_type %i 12 %) /*key*/ key %% (% key_name "collection_date" key_type %i 12 %) /*key*/ key %% (% key_name "country" key_type %i 12 %) /*key*/ key %% (% key_name "culture_collection" key_type %i 12 %) /*key*/ key %% (% key_name "date" key_type %i 12 %) /*key*/ key %% (% key_name "description" key_type %i 12 %) /*key*/ key %% (% key_name "embl_class" key_type %i 12 %) /*key*/ key %% (% key_name "embl_division" key_type %i 12 %) /*key*/ key %% (% key_name "fullname_ltp" key_type %i 12 %) /*key*/ key %% (% key_name "gene" key_type %i 12 %) /*key*/ key %% (% key_name "habitat_slv" key_type %i 12 %) /*key*/ key %% (% key_name "hi_tax_ltp" key_type %i 12 %) /*key*/ key %% (% key_name "homop_events_slv" key_type %i 3 %) /*key*/ key %% (% key_name "homop_slv" key_type %i 4 %) /*key*/ key %% (% key_name "host" key_type %i 12 %) /*key*/ key %% (% key_name "identified_by" key_type %i 12 %) /*key*/ key %% (% key_name "insdc" key_type %i 3 %) /*key*/ key %% (% key_name "isolate" key_type %i 12 %) /*key*/ key %% (% key_name "isolation_source" key_type %i 12 %) /*key*/ key %% (% key_name "journal" key_type %i 12 %) /*key*/ key %% (% key_name "lat_lon" key_type %i 12 %) /*key*/ key %% (% key_name "nuc" key_type %i 3 %) /*key*/ key %% (% key_name "nuc_gene_slv" key_type %i 3 %) /*key*/ key %% (% key_name "nuc_region" key_type %i 12 %) /*key*/ key %% (% key_name "nuc_rp" key_type %i 12 %) /*key*/ key %% (% key_name "pcr_primers" key_type %i 12 %) /*key*/ key %% (% key_name "phyl_ltp" key_type %i 12 %) /*key*/ key %% (% key_name "pintail_slv" key_type %i 3 %) /*key*/ key %% (% key_name "publication_doi" key_type %i 12 %) /*key*/ key %% (% key_name "pubmed_id" key_type %i 12 %) /*key*/ key %% (% key_name "rel_ltp" key_type %i 12 %) /*key*/ key %% (% key_name "riskgroup_ltp" key_type %i 12 %) /*key*/ key %% (% key_name "seq_quality_slv" key_type %i 3 %) /*key*/ key %% (% key_name "start" key_type %i 3 %) /*key*/ key %% (% key_name "stop" key_type %i 3 %) /*key*/ key %% (% key_name "strain" key_type %i 12 %) /*key*/ key %% (% key_name "sub_species" key_type %i 12 %) /*key*/ key %% (% key_name "submit_author" key_type %i 12 %) /*key*/ key %% (% key_name "submit_date" key_type %i 12 %) /*key*/ key %% (% key_name "tax_embl" key_type %i 12 %) /*key*/ key %% (% key_name "tax_embl_name" key_type %i 12 %) /*key*/ key %% (% key_name "tax_greengenes" key_type %i 12 %) /*key*/ key %% (% key_name "tax_greengenes_name" key_type %i 12 %) /*key*/ key %% (% key_name "tax_ltp" key_type %i 12 %) /*key*/ key %% (% key_name "tax_ltp_name" key_type %i 12 %) /*key*/ key %% (% key_name "tax_rdp" key_type %i 12 %) /*key*/ key %% (% key_name "tax_rdp_name" key_type %i 12 %) /*key*/ key %% (% key_name "tax_slv" key_type %i 12 %) /*key*/ key %% (% key_name "tax_xref_embl" key_type %i 12 %) /*key*/ key %% (% key_name "title" key_type %i 12 %) /*key*/ key %% (% key_name "turn_slv" key_type %i 12 %) /*key*/ key %% (% key_name "type_ltp" key_type %i 12 %) /*key*/ key %% (% key_name "url_lpsn_ltp" key_type %i 12 %) /*key*/ key %% (% key_name "vector_slv" key_type %i 4 %) /*key*/ key %% (% key_name "version" key_type %i 3 %) /*key*/ %) /*key_data*/ %) /*presets*/ description "- excerpt of LTP132_SSU\n- used for testing field data\n- gaps removed from sequence data\n" extended_data :7000 %% (% extended %% (% name :7000 "ECOLI" errors %i 0 acc "J01695" full_name "Escherichia coli" ali_16s %% (% data "AUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGAAGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGG-CCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUA" %) /*ali_16s*/ aligned "12dec94" showsec %i 0 %) /*extended*/ extended %% (% name :7000 "HELIX" ali_16s %% (% data "<[]>>>].[<<<.<<<<<[.[<<<<<<[[....[<<.<<[..[<<..<<<<<..<<<<<<<<<<....>>>>>>>.>>>>>.>>>>>]......[<[......[<<<<<<<.<<...<<<<<<[.[<<<<<<..<<[[<<....>>]]>>...>>>>>>].....<<<....>>>....[<<<<<..<<....>>>>>>>].]>>>>>>..>>>>>>>>>][<<<<<<<<<..<<<<<<<[.......]>>>>>>>>>>>..>>>>>]..[<<<<<<[....]>>>...>>>]]>].[<<<<<[........]>>>>>].[<<[....]>>]...]>>>>].].....[.<<<...<<<<[....]>>>>.>>>].]>.>>>>>]..[<<<<..<<<<<<[....]>>>>>>>.>>>].[<<.<.<<<<<<<<<.<<<<<<<<<.......>>>>>>>>>>>..>.>>>>>>>>..>]...[<<<[[<[...[<<<<[[...[[.]>]]].....]]>>>>]]>>>].]>>>>>>>>].......[<<<<[[[....[<<<<.<<<<<[[<<<<<<.<<<<<<<<<<<.....<<<<<<.....>>>>>>...>>>>>>>>..>>>>>>>>>]...[<<<<<<<<.<<<<<<<[[<.<<<<<<<<<...<<[......]>>......>>>>>>>>>.>]....[..<[....]>]]>>>>>>>>>>>.>>>>]..]>>>>>.>>>>]...[<<<<<<...<...<<<[.........]>>>...>>>>>>>]..........[<<<<<[.[<<<<<<<<<<<.....>>>>>>>>>>>]...[[..]]]]....]>>>>>].]>>>>].[<<[..[<<[....]>>]...]>>]..]>>]..[<<<<.<<<<<<[....[<<<<[.[<<<<<<<<<[....[<<[........]>>]........[<<<<<[......[<<<<<[..[<<<<<[....]>>>>>].[<<<....>>>]]>>>>.>].[<<.<<<..<<<<<<<.<<<<[[<<<<[[<[....]>]..[<<[......]>>]..]>>>>].....[<<<[[<<<<<<.<<<[..<<<<...>.>>>]>>>..>>>>>>].....[<<<<.....>>>>].......]>>>].]>>>>.>.>>>...>>>>>>>>]...]>>>>>]...]>.>>>>>>>>]....[<<<<<<.....<<[.[<<<<<<<[....]>>>>>>>]...]>>.....>>>>>>]......[<<<<<<<<<<<........>>>>>>>>>>>].....]>>>>]....[<<<<<<[.......]>>>>>>]...........]>>>>>>>>>.>]....[<.<<<<.<<<<<<<<<<<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>>>>>>>>>>>..>>>>.." _STRUCT "MAX_INDEX=860631\nROOT_ANGLE=1.32184\nLOOP={\n\tRADIUS=0:0\n\tSEGMENT={\n\t\tSEQ=268:0\n\t}\n\tSTRAND={\n\t\tSEQ=0:1\n\t\tDELTA=3.85806\n\t\tDELTA_IN=0.716469\n\t\tLENGTH=21.9537:0\n\t\tLOOP={\n\t\t\tRADIUS=0:0\n\t\t\tSEGMENT={\n\t\t\t\tSEQ=1:2\n\t\t\t}\n\t\t\tSTRAND={\n\t\t\t\tSEQ=2:3\n\t\t\t\tDELTA=3.11962\n\t\t\t\tDELTA_IN=6.26121\n\t\t\t\tLENGTH=0:0\n\t\t\t\tLOOP={\n\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=3:4\n\t\t\t\t\t}\n\t\t\t\t\tSTRAND={\n\t\t\t\t\t\tSEQ=4:5\n\t\t\t\t\t\tDELTA=1.87164\n\t\t\t\t\t\tDELTA_IN=5.01323\n\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=5:6\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=6:7\n\t\t\t\t\t\t\t\tDELTA=1.37457\n\t\t\t\t\t\t\t\tDELTA_IN=4.51616\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=7:8\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=8:9\n\t\t\t\t\t\t\t\t\t\tDELTA=5.84016\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=2.69857\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=9:10\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=10:11\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=11:12\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=12:13\n\t\t\t\t\t\t\t\t\t\tDELTA=1.47018\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=4.61177\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=13:14\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=14:15\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA=1.00975\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=4.15134\n\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=15:16\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=16:17\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA=5.61351\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=2.47192\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=17:18\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=18:19\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=19:20\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=20:21\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA=1.03018\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=4.17177\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=21:22\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=22:23\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=23:24\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=24:25\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA=1.98164\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=5.12324\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=25:26\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=26:27\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=27:28\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=28:29\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA=2.74563\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=5.88722\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=29:30\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=30:31\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=31:32\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=32:33\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=33:33\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=34:35\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA=2.27847\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=5.42006\n\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=35:36\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=36:37\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=37:38\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=38:39\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA=2.78543\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=5.92702\n\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=39:40\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=40:41\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=41:41\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=41:42\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=42:43\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=43:44\n\t\t\t\t\t\t\t\t\t\tDELTA=2.85945\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=6.00104\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=44:45\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=45:46\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=46:47\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=47:48\n\t\t\t\t\t\t\t\t\t\tDELTA=3.36462\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=0.223031\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=48:49\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=49:50\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=50:51\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=51:52\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=52:53\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=53:54\n\t\t\t\t\t\t\t\tDELTA=3.12355\n\t\t\t\t\t\t\t\tDELTA_IN=6.26515\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=54:55\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=55:56\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=56:57\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t}\n\t\t\t\t\t\tSEQ=57:58\n\t\t\t\t\t}\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=58:59\n\t\t\t\t\t}\n\t\t\t\t\tSTRAND={\n\t\t\t\t\t\tSEQ=59:60\n\t\t\t\t\t\tDELTA=2.96152\n\t\t\t\t\t\tDELTA_IN=6.10311\n\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=60:61\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t}\n\t\t\t\t\t\tSEQ=61:62\n\t\t\t\t\t}\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=62:63\n\t\t\t\t\t}\n\t\t\t\t\tSTRAND={\n\t\t\t\t\t\tSEQ=63:64\n\t\t\t\t\t\tDELTA=3.56632\n\t\t\t\t\t\tDELTA_IN=0.424731\n\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=64:65\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t}\n\t\t\t\t\t\tSEQ=65:66\n\t\t\t\t\t}\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=66:67\n\t\t\t\t\t}\n\t\t\t\t\tSTRAND={\n\t\t\t\t\t\tSEQ=67:68\n\t\t\t\t\t\tDELTA=4.64894\n\t\t\t\t\t\tDELTA_IN=1.50735\n\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=68:69\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=69:70\n\t\t\t\t\t\t\t\tDELTA=5.5282\n\t\t\t\t\t\t\t\tDELTA_IN=2.38661\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=70:71\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=71:72\n\t\t\t\t\t\t\t\t\t\tDELTA=4.59215\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=1.45056\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=72:73\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=73:74\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=74:75\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=75:76\n\t\t\t\t\t\t\t\t\t\tDELTA=5.05178\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=1.91019\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=76:77\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=77:78\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=78:79\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=79:80\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=80:80\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t}\n\t\t\t\t\t\tSEQ=81:82\n\t\t\t\t\t}\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=82:83\n\t\t\t\t\t}\n\t\t\t\t}\n\t\t\t\tSEQ=83:84\n\t\t\t}\n\t\t\tSEGMENT={\n\t\t\t\tSEQ=84:85\n\t\t\t}\n\t\t\tSTRAND={\n\t\t\t\tSEQ=85:86\n\t\t\t\tDELTA=5.17909\n\t\t\t\tDELTA_IN=2.0375\n\t\t\t\tLENGTH=6.9046:0\n\t\t\t\tLOOP={\n\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=86:87\n\t\t\t\t\t}\n\t\t\t\t\tSTRAND={\n\t\t\t\t\t\tSEQ=87:88\n\t\t\t\t\t\tDELTA=4.21001\n\t\t\t\t\t\tDELTA_IN=1.06842\n\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=88:89\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=89:90\n\t\t\t\t\t\t\t\tDELTA=3.00567\n\t\t\t\t\t\t\t\tDELTA_IN=6.14726\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=90:91\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=91:92\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=92:93\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=93:94\n\t\t\t\t\t\t\t\tDELTA=3.07532\n\t\t\t\t\t\t\t\tDELTA_IN=6.21692\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=94:95\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=95:96\n\t\t\t\t\t\t\t\t\t\tDELTA=2.71537\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=5.85696\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=96:97\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=97:98\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=98:99\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=99:100\n\t\t\t\t\t\t\t\t\t\tDELTA=3.86621\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=0.724619\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=100:101\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=101:102\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=102:103\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=103:104\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=104:105\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=105:106\n\t\t\t\t\t\t\t\tDELTA=3.50113\n\t\t\t\t\t\t\t\tDELTA_IN=0.359541\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=106:107\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=107:108\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=108:108\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=108:109\n\t\t\t\t\t\t\t\tDELTA=4.21116\n\t\t\t\t\t\t\t\tDELTA_IN=1.06957\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=109:110\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=110:111\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=111:111\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=112:113\n\t\t\t\t\t\t\t\tDELTA=4.67032\n\t\t\t\t\t\t\t\tDELTA_IN=1.52873\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=113:114\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=114:115\n\t\t\t\t\t\t\t\t\t\tDELTA=4.0846\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=0.943011\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=115:116\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=116:117\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=117:118\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=118:119\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=119:120\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=120:121\n\t\t\t\t\t\t\t\tDELTA=5.97211\n\t\t\t\t\t\t\t\tDELTA_IN=2.83052\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=121:122\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=122:123\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=123:124\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=124:125\n\t\t\t\t\t\t\t\tDELTA=6.08765\n\t\t\t\t\t\t\t\tDELTA_IN=2.94606\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=125:126\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=126:127\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=127:128\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=128:129\n\t\t\t\t\t\t\t\tDELTA=5.50923\n\t\t\t\t\t\t\t\tDELTA_IN=2.36763\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=129:130\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=130:131\n\t\t\t\t\t\t\t\t\t\tDELTA=4.04711\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=0.905518\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=131:132\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=132:133\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=133:134\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=134:135\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=135:136\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t}\n\t\t\t\t\t\tSEQ=136:137\n\t\t\t\t\t}\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=137:138\n\t\t\t\t\t}\n\t\t\t\t\tSTRAND={\n\t\t\t\t\t\tSEQ=138:139\n\t\t\t\t\t\tDELTA=5.22662\n\t\t\t\t\t\tDELTA_IN=2.08503\n\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=139:140\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t}\n\t\t\t\t\t\tSEQ=140:141\n\t\t\t\t\t}\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=141:142\n\t\t\t\t\t}\n\t\t\t\t\tSTRAND={\n\t\t\t\t\t\tSEQ=142:143\n\t\t\t\t\t\tDELTA=0.321373\n\t\t\t\t\t\tDELTA_IN=3.46297\n\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=143:144\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=144:145\n\t\t\t\t\t\t\t\tDELTA=5.11046\n\t\t\t\t\t\t\t\tDELTA_IN=1.96887\n\t\t\t\t\t\t\t\tLENGTH=5.02281:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=145:146\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=146:147\n\t\t\t\t\t\t\t\t\t\tDELTA=0.922877\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=4.06447\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=147:148\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=148:149\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=149:150\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=150:151\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=151:152\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t}\n\t\t\t\t\t\tSEQ=152:153\n\t\t\t\t\t}\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=153:154\n\t\t\t\t\t}\n\t\t\t\t}\n\t\t\t\tSEQ=154:155\n\t\t\t}\n\t\t\tSEGMENT={\n\t\t\t\tSEQ=155:156\n\t\t\t}\n\t\t\tSTRAND={\n\t\t\t\tSEQ=156:157\n\t\t\t\tDELTA=0.289892\n\t\t\t\tDELTA_IN=3.43148\n\t\t\t\tLENGTH=0:0\n\t\t\t\tLOOP={\n\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=157:158\n\t\t\t\t\t}\n\t\t\t\t\tSTRAND={\n\t\t\t\t\t\tSEQ=158:159\n\t\t\t\t\t\tDELTA=0.183011\n\t\t\t\t\t\tDELTA_IN=3.3246\n\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=159:160\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t}\n\t\t\t\t\t\tSEQ=160:161\n\t\t\t\t\t}\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=161:162\n\t\t\t\t\t}\n\t\t\t\t}\n\t\t\t\tSEQ=162:163\n\t\t\t}\n\t\t\tSEGMENT={\n\t\t\t\tSEQ=163:164\n\t\t\t}\n\t\t}\n\t\tSEQ=164:165\n\t}\n\tSEGMENT={\n\t\tSEQ=165:166\n\t}\n\tSTRAND={\n\t\tSEQ=166:167\n\t\tDELTA=5.84897\n\t\tDELTA_IN=2.70738\n\t\tLENGTH=33.8175:0\n\t\tLOOP={\n\t\t\tRADIUS=0:0\n\t\t\tSEGMENT={\n\t\t\t\tSEQ=167:168\n\t\t\t}\n\t\t\tSTRAND={\n\t\t\t\tSEQ=168:169\n\t\t\t\tDELTA=4.75282\n\t\t\t\tDELTA_IN=1.61123\n\t\t\t\tLENGTH=0:0\n\t\t\t\tLOOP={\n\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=169:170\n\t\t\t\t\t}\n\t\t\t\t\tSTRAND={\n\t\t\t\t\t\tSEQ=170:171\n\t\t\t\t\t\tDELTA=2.95937\n\t\t\t\t\t\tDELTA_IN=6.10097\n\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=171:172\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=172:173\n\t\t\t\t\t\t\t\tDELTA=1.17361\n\t\t\t\t\t\t\t\tDELTA_IN=4.3152\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=173:174\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=174:175\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=175:176\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=176:177\n\t\t\t\t\t\t\t\tDELTA=4.64996\n\t\t\t\t\t\t\t\tDELTA_IN=1.50837\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=177:178\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=178:179\n\t\t\t\t\t\t\t\t\t\tDELTA=4.4254\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=1.28381\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=179:180\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=180:181\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA=3.39621\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=0.254614\n\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=181:182\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=182:183\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=183:184\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=184:185\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA=5.29905\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=2.15746\n\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=185:186\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=186:187\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=187:188\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=188:189\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=189:190\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\tSEQ=190:191\n\t\t\t\t\t\t\t\t\t\tDELTA=5.29306\n\t\t\t\t\t\t\t\t\t\tDELTA_IN=2.15147\n\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=191:191\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=192:193\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA=3.66954\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=0.52795\n\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=193:193\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=193:194\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA=2.26633\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=5.40792\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=194:195\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=195:196\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=196:197\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=197:198\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA=4.33953\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=1.19794\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=198:199\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=199:200\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=200:201\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=201:202\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=202:203\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=203:204\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA=5.7802\n\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=2.63861\n\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=3.32394:0\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=204:205\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=205:206\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA=4.18896\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=1.04736\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=206:206\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=207:208\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA=4.21721\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=1.07561\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=208:209\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=209:210\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA=3.06783\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=6.20943\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=210:211\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=211:212\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=212:213\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=213:214\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA=6.01184\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=2.87025\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=214:215\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=215:216\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=216:217\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=217:218\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=218:219\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=219:220\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA=4.97519\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=1.83359\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=220:221\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=221:222\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=222:223\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=223:224\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=224:225\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=225:226\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA=5.98323\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tDELTA_IN=2.84164\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=226:227\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=227:228\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\t\t\tSEQ=228:229\n\t\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=229:230\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\t\t\tSEQ=230:231\n\t\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\t\tSEQ=231:232\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=232:233\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=233:234\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=234:235\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t}\n\t\t\t\t\t\tSEQ=235:236\n\t\t\t\t\t}\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=236:237\n\t\t\t\t\t}\n\t\t\t\t\tSTRAND={\n\t\t\t\t\t\tSEQ=237:238\n\t\t\t\t\t\tDELTA=4.99139\n\t\t\t\t\t\tDELTA_IN=1.8498\n\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=238:239\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=239:240\n\t\t\t\t\t\t\t\tDELTA=3.80534\n\t\t\t\t\t\t\t\tDELTA_IN=0.663751\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=240:241\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=241:242\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=242:243\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSTRAND={\n\t\t\t\t\t\t\t\tSEQ=243:244\n\t\t\t\t\t\t\t\tDELTA=5.34933\n\t\t\t\t\t\t\t\tDELTA_IN=2.20774\n\t\t\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\t\t\tSEQ=244:245\n\t\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\t\tSEQ=245:246\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=246:247\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t}\n\t\t\t\t\t\tSEQ=247:248\n\t\t\t\t\t}\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=248:249\n\t\t\t\t\t}\n\t\t\t\t\tSTRAND={\n\t\t\t\t\t\tSEQ=249:250\n\t\t\t\t\t\tDELTA=6.20908\n\t\t\t\t\t\tDELTA_IN=3.06749\n\t\t\t\t\t\tLENGTH=0:0\n\t\t\t\t\t\tLOOP={\n\t\t\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\t\t\tSEQ=250:251\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t}\n\t\t\t\t\t\tSEQ=251:252\n\t\t\t\t\t}\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=252:253\n\t\t\t\t\t}\n\t\t\t\t}\n\t\t\t\tSEQ=253:254\n\t\t\t}\n\t\t\tSEGMENT={\n\t\t\t\tSEQ=254:255\n\t\t\t}\n\t\t\tSTRAND={\n\t\t\t\tSEQ=255:256\n\t\t\t\tDELTA=0.160304\n\t\t\t\tDELTA_IN=3.3019\n\t\t\t\tLENGTH=0:0\n\t\t\t\tLOOP={\n\t\t\t\t\tRADIUS=0:0\n\t\t\t\t\tSEGMENT={\n\t\t\t\t\t\tSEQ=256:257\n\t\t\t\t\t}\n\t\t\t\t}\n\t\t\t\tSEQ=257:258\n\t\t\t}\n\t\t\tSEGMENT={\n\t\t\t\tSEQ=258:259\n\t\t\t}\n\t\t}\n\t\tSEQ=259:260\n\t}\n\tSEGMENT={\n\t\tSEQ=260:261\n\t}\n\tSTRAND={\n\t\tSEQ=261:262\n\t\tDELTA=0.309839\n\t\tDELTA_IN=3.45143\n\t\tLENGTH=30.2739:0\n\t\tLOOP={\n\t\t\tRADIUS=0:0\n\t\t\tSEGMENT={\n\t\t\t\tSEQ=262:263\n\t\t\t}\n\t\t}\n\t\tSEQ=263:264\n\t}\n\tSEGMENT={\n\t\tSEQ=264:265\n\t}\n\tSTRAND={\n\t\tSEQ=265:266\n\t\tDELTA=0.682731\n\t\tDELTA_IN=3.82432\n\t\tLENGTH=0:0\n\t\tLOOP={\n\t\t\tRADIUS=0:0\n\t\t\tSEGMENT={\n\t\t\t\tSEQ=266:267\n\t\t\t}\n\t\t}\n\t\tSEQ=267:268\n\t}\n}\n" _REF "........x...........x............x........x...................................................x..x.....x.....................x.....................................................x......................x..................x..........................x.....................x...........x..........x...x..............x......xx.......x......x............x................x..........x........x.x.................x............x............................................................x.x..........x.........x.....x.......x.....x....xx.........x......x...........x...........x..................................................................x.................x.......................x....................................x...................x..............x..........................x..............x.........x.......x...........................................x......xx.....xx...x.x.......x......x.....x...x.x................x......x..............x...........x...x.......x............x........x..........x.......x...........x........x.....................x.....x......x..x.x.........x.....x..........x....x.........................x.................x.....................x.....x.........................x.........x...............x..............xx............x...........x....................x....................................x.....x...x..............x..................x............x...x.................................................................................................." %) /*ali_16s*/ showsec %i 0 %) /*extended*/ extended %% (% name :7000 "HELIX_NR" ali_16s %% (% data "..1.....3...........4.......1....5........6...................................................7........8.....................9..........929.....09.9...............................1......................8..................1..........................1.....................1...........1..........7...14.............1.......15......1......5......1.....16...............1..........4..........1.................1.............1.............................................................19...1.....2.....49..59.19.5......421....19....3........3.......2.....12....2...........2..................................................................2.................24......................24.......................2........2..2...................21.............2..........................2........................2.......2...............................2...1.2.....2.......20.....3.....10......1......30....2.....3................3......3..............3...........3...........35...........3........3..........3.......3...........36.......3.....................40....4......41...4.........42....4..........4....44..........4.............4.................45....................4.....39........................3.........3.........33....4...............26...........24..........46...................4....................................3.........48.............48.................31...............4.................................................................................................." %) /*ali_16s*/ showsec %i 0 %) /*extended*/ extended %$ (% name :7000 "CONSENSUS" ali_16s %% (% data "AUGGCUCAGAUUGAACGCUGGCGGUAUGCCUAACACAUGCAAGUCGAACGGCAGCAGGAAGUACCUCGCGACUUUGCCGACGAGCGGCGGACGGGUGAGUAAUGCAUAGGAAACUGCCCCAUAGAGGGGGAUAACGACGGGAAACGCACGCUAAUACCGCAUAACACCUACGGACCAAAGCGGGGGACCUUCGGGCCUCACACCAUCAGAUGAGCCCAGAUGGGAUUAGCUAGUAGGUAGGGUAAUGGCCCACCAAGGCGACGAUCCAUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUCCAGCAAUACCGCGUGUGUGAAGAAGGCCUGAGGGUUGUAAAGCACUUUCAACGAGAAGGAAGACCUAGCGGCGAAUACCACCAAGAACUGACAUUACCCACACAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUGAGUUAAGUCAGAUGUGAAAGCCCCGAGCUUAACCUGGGAACUGCAUUUGAAACUGGCAAACUAGAGUCGAGUAGAGGAGAGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGAAGGAACACCAGUGGCGAAGGCGGCCCCCUGGACAAAAACUGACGCUCAGGUACGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCAACUAACAGGUGGGGCCCUAAAGAACUGACUGCCGGAGCUAACGCAUUAAGUCGACCGCCUGGGGAGUACGGCCGCAAGGCUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUACCCUUGACAUCCACAGAAUCUGCUAGAGAUAGCGGAGUGCCUUCGGGAACCCUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUAGUUGCCAACACGUCAGGCUGGGAACUCAAAGGAGACUGCCGGUGAUAAACCGGAGGAAGGUGGGGACGACGUCAAGUCAUCAUGGCCCUUACGAGUAGGGCUACACACGUGCUACAAUGGCAGAUACAAAGAGAAGCAAACUCGCGAGAGCAAGCAAACCCCAAAAAGCAGGUCCUAGUCCGGAUCGCAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGCAGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUA" _TYPE "CON: [species: marked] [number: 2] [count gaps: on] [threshold for gaps: 100] [simplify: off] [threshold for group: 30] [upper: 0] [lower: 0]" _SPECIES "SrrAquat MhyPalud " %) /*ali_16s*/ showsec %i 0 %) /*extended*/ %) /*extended_data*/ tree_data :7000 %% (% tree_LTPs132_SSU %% (% tree "N0.0099308,0.0099308;N0.112359,0.100396;N0.0379893,0.0480358;N0.0983123,0.0713396;N0.060164,0.175079;N0.00351545,0.193431;N0.0716409,0.0364879;N0.122872,0.0114286;LErwOleae\ALPurGergo\AN0.0232085,0.00712251;LYerKrist\ALSrrAquat\ALGlmApico\ALVibJapon\ALMhyPalud\AN0.11406,0.173659;N0.139683,0.292305;LBurCalid\ALStxAceti\ALXanCucur\AN0.191438,0.285707;LAgrSp148\ALPslBats2\AN0.0173909,0.0285647;N0.0109464,0.35726;N0.0101302,0.0154242;N0.0497341,0.0826764;N0.440396,0.250368;LMtpKand2\ALOcgTerie\AN0.18521,0.105086;LPesPropi\ALDstHafn2\AN0.0920159,0.267022;N0.213613,0.0363128;LClaMich8\ALAcsCell2\ALHrpAura2\ALCytHutc2\AN0.265779,0.221296;LTreIsopt\ALIlyPoly2\A" nnodes %i 21 remark "All-Species Living Tree. 16S rRNA. April 2018\n\ntree_LTPs132_SSU:\nNew sequences in this tree were added to the previous\nrelease (LTPs128) using ARB parsimony.\n\nLTP 30% maximum frequency filter was used.\n\nGroups are displayed accordingly to monophyletism and\nvalid taxonomic affiliations when possible. The\nphylogeny of each species is capitulated in the\nfield \"phyl_ltp\"." security %i 0 ruler %% (% size %f 0.01 LIST %% (% ruler_y %f 0 ruler_x %f 0 text_x %f 0 text_y %f -3.252698e-03 %) /*LIST*/ ruler_width %i 0 IRS %% (% ruler_y %f 0 ruler_x %f 0 text_x %f 0 text_y %f 0 %) /*IRS*/ %) /*ruler*/ node %% (% group_name "Firmicutes, Tenericutes, Negativicutes and Cyanobacteria" id %i 17 %) /*node*/ node %% (% group_name "Alpha, Beta and Gammaproteobacteria" id %i 1 %) /*node*/ order %i 3 node %% (% id %i 5 group_name "Enterobacterales, Pasteurellales and Orbales" %) /*node*/ node %% (% id %i 10 group_name "Betaproteobacteria" %) /*node*/ node %% (% id %i 2 group_name "Gammaproteobacteria and Betaproteobacteria" %) /*node*/ node %% (% id %i 11 group_name "Alphaproteobacteria" %) /*node*/ node %% (% id %i 19 group_name "Actinobacteria" %) /*node*/ node %% (% id %i 16 group_name "Bacteria" keeled %i 1 %) /*node*/ node %% (% id %i 8 group_name "Yersiniaceae, Hafniaceae and Budviciaceae" %) /*node*/ %) /*tree_LTPs132_SSU*/ %) /*tree_data*/ focus %% (% tree_name "tree_LTPs132_SSU" configuration "bergey" %) /*focus*/ nt %% (% gene_content "" target_string "" primer_target_string "" %) /*nt*/ sai_visualize %% (% %) /*sai_visualize*/ probe_collection %% (% match_weights %% (% %) /*match_weights*/ %) /*probe_collection*/ track %% (% %) /*track*/ submission %% (% %) /*submission*/ genom_db %i 0 configuration_data %% (% win0 %% (% %) /*win0*/ configuration %% (% name "default_configuration" top_area "\ASECOLI\ASHELIX\ASHELIX_NR" middle_area "\AGSAI-Maingroup\AFSAI:SAI's\ASCONSENSUS\AE\AE\AFMore Sequences\AE\AGAlpha, Beta and Gammaproteobacteria\AGGammaproteobacteria and Betaproteobacteria\AGEnterobacterales, Pasteurellales and Orbales\AGYersiniaceae, Hafniaceae and Budviciaceae\ALSrrAquat\AE\AE\ALMhyPalud\AE\AE" comment "This configuration will be OVERWRITTEN each time\nARB_EDIT4 is started w/o specifying a config!\n---\nMon Mar 18 11:21:17 2019: created for ARB_EDIT4 (tree=tree_LTPs132_SSU)\n" %) /*configuration*/ %) /*configuration_data*/ checks %% (% check "fix gene_data" check "fix_dict_compress" check "del_mark_move_REF" check "duplicated_item_colors" %) /*checks*/