/*ARBDB ASCII*/ species_data %% (% species :5000 %$ (% name :7600 "CytLyti6" flag :7000 "m" full_name "Cytophaga lytica" acc "ARB_6B3852E" transl_table "12" codon_start "2" ali_dna %% (% data :7000 "---------ATGGCAAAGGAAACTTTTGATCGTTCCAAACCGCACTTAAATATAGGTACTATTGGACACGTAGATCACGGTAAAACTACTTTAACTGCTGCTATTACAASAGTATTG---------" %) /*ali_dna*/ ali_pro %% (% data :7000 "XWQRKLLIVPNRT*-I*-VLLDT*ITVKLL*SSLLZZYX-X." %) /*ali_pro*/ %) /*species*/ species :5000 %$ (% name :7600 "TaxOcell" flag :7000 "m" full_name "Taxeobacter ocellatus" acc "ARB_21595EF" transl_table "21" codon_start "2" ali_dna %% (% data :7000 "------------------ATGGCTAAAGAAACTTTTGACCGGTCCAAGCCGCACGTAAACATCGGCACGATCGGTCACGTGGACCACGGCAAAACGACTCTGACCGCTGCTATCACCACGGTGCTG" %) /*ali_dna*/ ali_pro %% (% data :7000 "XG*SNFWPVQAARNHRHD--RSRGPRQBDSDRCYHHGAX-.." %) /*ali_pro*/ %) /*species*/ species :5000 %$ (% name :7600 "BctFra12" flag :7000 "h" full_name "Bacteroides fragilis" acc "ARB_4560B41C" transl_table "1" codon_start "2" ali_dna %% (% data :7000 "ATGGCTAAAGAGAAATTTGAACGTACCAAACCGCACGTAAACATTGGTACAATCGGTCACGTTGACCACGGTAAAACCACTTTGACTGCTGCTATCACTACTGTGTTG------------------" %) /*ali_dna*/ ali_pro %% (% data :7000 "MAKEK-FERTK-PHVNIGT-IGHVDHGKTTLTAAITTVLX.." %) /*ali_pro*/ %) /*species*/ species :5000 %$ (% name :7600 "StrRamo3" flag :7000 "h" full_name "Streptomyces ramocissimus" acc "ARB_30F12BA8" transl_table "1" codon_start "2" ali_dna %% (% data :7000 "ATGTCCAAGACGGCATACGTGCGCACCAAACCGCATCTGAACATCGGCACGATGGGTCATGTCGACCACGGCAAGACCACGTTGACCGCCGCCATCACCAAGGTCCTC------------------" %) /*ali_dna*/ ali_pro %% (% data :7000 "MSKTAYVRTKPHLNIGTMGHVDHGKTTLTAAITKVXXX-X.." %) /*ali_pro*/ %) /*species*/ species :5000 %$ (% name :7600 "StrCoel9" acc "X77040" full_name "Streptomyces coelicolor" transl_table "1" codon_start "1" ali_dna %% (% data :7000 "------------------------------------ATGTCCAAGACGGCGTACGTCCGCCCACCTGAGGCACGATGGCCCGACCACGGCAAGACCACCCTGACCGCCGCCATCACCAAGGTCCTC" %) /*ali_dna*/ ali_pro %% (% data :7000 "MSKTAYVRXXXXXX-GTMXXXDHGKTTLTAAITKVXX--X.." %) /*ali_pro*/ %) /*species*/ species :5000 %$ (% name :7600 "MucRacem" flag :7000 "h" full_name "Mucor racemosus" acc "ARB_5ADBD66E" transl_table "1" codon_start "2" ali_dna %% (% data :7000 "...........ATGGGTAAAGAGAAGACTCACGTTAACGTCGTCGTCATTGGTCACGTCGATTCCGGTAAATCTACTACTACTGGTCACTTGATTTACAAGTGTGGTGGTATAAA-----------" %) /*ali_dna*/ ali_pro %% (% data :7000 "..MGKE---KTHVNVVVIGHVDSGKSTTTGHLIYKCGGIX.." %) /*ali_pro*/ %) /*species*/ species :5000 %$ (% name :7600 "MucRace2" flag :7000 "h" full_name "Mucor racemosus" acc "ARB_3627F120" transl_table "1" codon_start "2" ali_dna %% (% data :7000 ".ATGGGTAAGGAGAAGACTCACGTTAACGTCGTCGTCATTGGTCACGTCGATTCCGGTAAATCTACTACTACTGGTCACTTGATTTACAAGTGTGGTGGT-ATNNN-ATAA-A------------." %) /*ali_dna*/ ali_pro %% (% data :7000 "MGKE---KTHVNVVVIGHVDSGKSTTTGHLIYKCGGXXXK--" %) /*ali_pro*/ %) /*species*/ species :5000 %$ (% name :7600 "MucRace3" flag :7000 "h" full_name "Mucor racemosus" acc "ARB_73CEEA74" transl_table "1" codon_start "1" ali_dna %% (% data :7000 "-----------ATGGGTAAAGAGAAGACTCACGTTRAYGTTGTCGTTATTGGTCACGTCRATTCCGGTAAGTCCACCNCCRCTGGTCACTTGATTTACAAGTGTGGTGGTATAA-A----------" %) /*ali_dna*/ ali_pro %% (% data :7000 "MGKXX----KTHVBVVVIGHVBSGKSTTTGHLIYKCGGIX.." %) /*ali_pro*/ %) /*species*/ species :5000 %$ (% name :7600 "AbdGlauc" flag :7000 "h" full_name "Absidia glauca" acc "ARB_A706F312" transl_table "1" codon_start "1" ali_dna %% (% data :7000 "----------------------ATGGGTAAAGAAAAGACTCACGTTAACGTCGTTGTCATTGGTCACGTCGATTCTGGTAAATCCACCACCACTGGTCATTTGATCTACAAGTGCGGTGGTATAAA" %) /*ali_dna*/ ali_pro %% (% data :7000 "MGKXXXXXXXXHVNVVVIGHVDSGKSTTTGHLIYKCGGIX.." %) /*ali_pro*/ %) /*species*/ species :5000 %$ (% name :7600 "CddAlbic" flag :7000 "h" full_name "Candida albicans" acc "ARB_10F3627F" transl_table "1" codon_start "1" ali_dna %% (% data :7000 "ATGGGTAAAGAAAAAACTCACGTTAACGTTGTTGTTATTGGTCACGTCGATTCCGGTAAATCTACTACCACCGGTCACTTAATTTACAAGTGTGGTGGTATAAA----------------------" %) /*ali_dna*/ ali_pro %% (% data :7000 "MXXXE----KTHVNVVVIGHVDSGKSTTTGHLIYKCGGIX.." %) /*ali_pro*/ %) /*species*/ %) /*species_data*/ tree_data %% (% tree_prot %% (% tree "N0.58482,3.41564;N0.58248,0.66885;N0.04119,0.27423;N0.27475,0.31772;LBctFra12\ALCytLyti6\ALTaxOcell\AN0.09705,0.15387;LStrRamo3\ALStrCoel9\AN0.12346,0.12108;N0.07553,0.07358;N0.06787,0.09757;N0.01554,-0.00981;LMucRacem\ALMucRace2\ALMucRace3\ALAbdGlauc\ALCddAlbic\A" nnodes %i 9 ruler %% (% size %f 0.1 RADIAL %% (% ruler_y %f 5.80564 ruler_x %f 0 %) /*RADIAL*/ text_x %f 0 text_y %f 0 ruler_width %i 0 LIST %% (% ruler_y %f 0 ruler_x %f 0 text_x %f 0 text_y %f 0 %) /*LIST*/ %) /*ruler*/ security %i 0 remark "Phylip Categories Neighbour dotgapmax _834\n[created as copy of 'tree_workdec']" node %% (% id %i 5 group_name "Eukarya EF-Tu" %) /*node*/ node %% (% id %i 1 group_name "Bacteria EF-Tu" %) /*node*/ node %% (% id %i 0 group_name "EF-Tu / EF-1a" %) /*node*/ order %i 1 %) /*tree_prot*/ %) /*tree_data*/ arb_presets %% 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