# HM May 2009

AUTODETECT      ">*ARB_GENE"

DESCRIPTION     "Imports sequences in FASTA format (does not remove gaps)"
DESCRIPTION     "Expected header: '>id fullname|...'"
DESCRIPTION     "If header contains 'ARB_GENE...' that will be used as 'acc'"

KEYWIDTH        1

BEGIN           ">??*"

MATCH           ">*"
                SRT "* *=*1:*\t*=*1"
                WRITE "name"

MATCH           ">*"
                SRT "*|*=*1:*\t*=*1"
                WRITE "full_name"

MATCH           ">*"
                SRT "* ARB_GENE*=ARB_GENE*2"
                WRITE "acc"


SEQUENCEAFTER   "*"
SEQUENCESRT     ""
SEQUENCEACI     "remove("0123456789 /")"
SEQUENCECOLUMN  0
SEQUENCEEND     ">*"

DONT_GEN_NAMES
# CREATE_ACC_FROM_SEQUENCE

END             "//"