#Please insert up references in the next lines (line starts with keyword UP) UP arb.hlp UP glossary.hlp UP pars.hlp UP mode_kernlin.hlp UP mode_nni.hlp #Please insert subtopic references (line starts with keyword SUB) #SUB subtopic.hlp # Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain} #************* Title of helpfile !! and start of real helpfile ******** TITLE Nearest Neighbour Interchange and K.L. Optimization OCCURRENCE ARB_NT/Tree/Parsimony/ DESCRIPTION Searches for a better (more parsimonious) tree by performing alternating cycles of 'Nearest Neighbour Interchange' and 'K.L.' optimizations. NOTES The current parsimony value (number of base changes needed) is displayed after the 'Current Par' prompt in the upper part of the 'ARB_PARSIMONY' window and the 'Message' window (pops up while calculating). EXAMPLES None WARNINGS None BUGS No bugs known