# HM May 2009
#
# Imports aligned sequences in FASTA-format to ARB.
#
# The first attribute in the FASTA header is written to DB field 'name' and
# the rest to both the fields 'longname' and 'acc'

AUTODETECT      ">*"

KEYWIDTH        1

BEGIN           ">??*"

MATCH           ">*"
                SRT "* *=*1:*\t*=*1"
                WRITE "name"

MATCH           ">*"
                SRT "*|*=*1:*\t*=*1"
                WRITE "full_name"

MATCH           ">*"
                SRT "* ARB_GENE*=ARB_GENE*2"
                WRITE "acc"


SEQUENCEAFTER   "*"
SEQUENCESRT     ""
SEQUENCEACI     "remove("0123456789 /")"
SEQUENCECOLUMN  0
SEQUENCEEND     ">*"

DONT_GEN_NAMES
# CREATE_ACC_FROM_SEQUENCE

END             "//"