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trunk [18842] westram 2021-11-14 6 8 39 47 * allow conditional build of OPENMP version of...
trunk [18841] westram 2021-11-12 3 8 22 30 * add progress to {{{neighbourjoining()}}}-pha...
trunk [18840] westram 2021-11-10 4 8 11 19 * also build OPENMP version of {{{FastTree}}} ...
trunk [18839] westram 2021-11-10 4 60 221 281 * upgrade {{{FastTree}}} to version 2.1.11 - c...
trunk/GDEHELP/MENUS/fasttree.menu [18838] westram 2021-11-10 1 2 2 * minor fixes to fasttree GUI: - only use sing...
trunk [18837] westram 2021-11-07 3 20 50 70 * add {{{FastTree}}} for protein. - mention ST...
trunk/GDEHELP [18836] westram 2021-11-07 2 10 8 18 * define items for "RAxML 7" using #defines - ...
trunk/GDEHELP [18835] westram 2021-11-07 2 12 7 19 * define items for "PHYML-20130708" using #def...
trunk/GDEHELP/HELP_WRITTEN/fasttree.help [18834] westram 2021-11-07 1 1 1 * use real LINK.
trunk/GDEHELP/HELP_WRITTEN [18833] westram 2021-11-07 5 46 46 * fix whitespace in HELP_WRITTEN.
trunk/GDEHELP [18832] westram 2021-11-07 3 2 7 9 * improve documentation of generated help.
trunk [18831] westram 2021-11-07 3 1 64 65 * improve GDE-menu robustness - warn if 'item'...
trunk [18830] westram 2021-11-07 3 4 4 * whitespace + typo.
trunk/GDEHELP/pp.pl [18829] westram 2021-11-07 1 6 7 13 * correctly skip handling of preprocessor dire...
trunk/TEMPLATES/cxxforward.h [18828] westram 2021-11-07 1 2 18 20 * prepare for Cxx17 builds.
trunk/MERGE [18827] westram 2021-11-05 2 20 18 38 * cleanup merge selectors.
trunk/MERGE/MG_extendeds.cxx [18826] westram 2021-11-05 1 2 62 64 * add SAI selectors for both databases - fixes...
trunk/MERGE/MG_species.cxx [18825] westram 2021-11-05 1 2 2 * merging via FTS into new database did not co...
trunk/GDEHELP [18824] westram 2021-11-04 2 25 25 * add help for fasttree (copied start of text ...
trunk/GDEHELP [18823] westram 2021-11-04 2 165 1 15 16 * split menufile for treepuzzle, mrbayes and f...
trunk/GDE/FASTTREE/Makefile [18822] westram 2021-11-04 1 5 2 7 * do not generate a local binary. * instead di...
trunk [18821] westram 2021-10-30 3 5 6 11 * ignore SIGPIPE while ArbDBWriter exists - ar...
trunk [18820] westram 2021-10-30 2 3 4 7 * avoid crash while saving arb database (see #...
trunk/SL/DB_SCANNER/db_scanner.cxx [18812] westram 2021-10-25 1 1 1 * fix assertion failure when (re-)mapping DB_K...
trunk [18789] westram 2021-10-12 3 4 2 6 * DEBUG and NDEBUG version of helpfiles: - hav...
trunk [18781] westram 2021-10-10 373 22401 142 21855 21997 * reintegrates 'help' into 'trunk' - relocate ...
trunk/HELP_SOURCE/oldhelp [18762] westram 2021-10-08 7 14 24 38 * update documentation: - reference most impor...
trunk/HELP_SOURCE/oldhelp [18761] westram 2021-10-08 5 37 9 46 * update documentation: - link between accessi...
trunk [18760] westram 2021-10-08 4 24 8 32 * change layout of 'Color Translation Table' p...
trunk/SL/DB_SCANNER [18756] westram 2021-10-07 2 2 9 11 * add {{{DbScanner::remap_item}}} - callback t...
trunk/WINDOW [18755] westram 2021-10-07 2 13 13 * add run_popup_callbacks(). - call from {{{AW...
trunk [18754] westram 2021-10-07 4 95 3 38 41 * define {{{ItemSelector}}} for SAIs (lacks ch...
trunk/HELP_SOURCE/oldhelp/reg.hlp [18753] westram 2021-10-06 1 2 10 12 * list some useful character classes. * show u...
trunk/ARBDB [18752] westram 2021-10-06 2 2 2 * eliminate obsolete {{{GBT_read_name}}} from ...
trunk/ARBDB [18751] westram 2021-10-04 2 11 1 12 * also rename overloaded {{{GB_path_in_ARBHOME...
trunk [18750] westram 2021-10-04 10 13 3 16 * fix unwanted export of overloaded functions ...
trunk/PERL2ARB/extract_perl_interface.pl [18749] westram 2021-10-04 1 1 1 * bail out when overloaded functions are expor...
trunk [18748] westram 2021-10-04 2 12 7 19 * explicitely define function prefixes. * link...
trunk/PERL2ARB/.gitignore [18747] westram 2021-10-02 1 1 1 * gitignore file generated since [18746]
trunk [18746] westram 2021-10-01 5 589 2 197 199 * adds a script which generates a list of perl...
trunk [18742] westram 2021-09-22 3 10 1 11 * use terminal background color (=default, mar...
trunk/EDIT4/ED4_manager.cxx [18741] westram 2021-09-20 1 1 16 17 * warn if all columns mapped in editor.
trunk/EDIT4 [18740] westram 2021-09-20 2 31 8 39 * refactored edit4 column remapper: - result o...
trunk/arb_README.txt [18735] westram 2021-09-17 1 1 1 * fix another obsolete URL
trunk [18734] westram 2021-09-17 3 2 8 10 * fix NDEBUG warnings: - conditionally compile...
trunk/SL/NDS/nds.cxx [18733] westram 2021-09-16 1 8 8 * fix leak - {{{NodeTextBuilder}}} now exist o...
trunk/AISC_COM/AISC [18731] westram 2021-09-15 3 24 3 27 * remove generated whitespace. - code generato...
trunk [18730] westram 2021-09-15 200 1165 1165 * remove trailing whitespace from c source.
trunk [18729] westram 2021-09-15 28 116 116 * eliminate trailing whitespace from Makefiles.
trunk/EISPACK/Makefile [18728] westram 2021-09-15 1 3 3 * move rule.